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SGTB small glutamine rich tetratricopeptide repeat co-chaperone beta [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 696763, updated on 17-Aug-2024

Summary

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Official Symbol
SGTBprovided by VGNC
Official Full Name
small glutamine rich tetratricopeptide repeat co-chaperone betaprovided by VGNC
Primary source
VGNC:VGNC:77296
Locus tag
EGK_16540
See related
Ensembl:ENSMMUG00000016521
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Also known as
Beta-SGT
Orthologs
human mouse all
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Genomic context

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See SGTB in Genome Data Viewer
Location:
chromosome: 6
Exon count:
12
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 6 NC_041759.1 (64234554..64295358, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 6 NC_027898.1 (63837387..63898082, complement)

Chromosome 6 - NC_041759.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene shieldin complex subunit 3 Neighboring gene tripartite motif containing 23 Neighboring gene trafficking protein particle complex subunit 13 Neighboring gene neurolysin Neighboring gene erbb2 interacting protein Neighboring gene U6 snRNA-associated Sm-like protein LSm8

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables molecular adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in post-translational protein targeting to endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of TRC complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
small glutamine-rich tetratricopeptide repeat-containing protein beta
Names
small glutamine rich tetratricopeptide repeat containing beta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041759.1 Reference Mmul_10 Primary Assembly

    Range
    64234554..64295358 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015140127.2 → XP_014995613.1  small glutamine-rich tetratricopeptide repeat-containing protein beta isoform X1

    UniProtKB/TrEMBL
    A0A1D5Q4A9, A0A8J8XVG6, F6WDT2, G7MU68
    Related
    ENSMMUP00000042873.1, ENSMMUT00000055060.2
    Conserved Domains (3) summary
    PLN03088
    Location:85 → 237
    PLN03088; SGT1, suppressor of G2 allele of SKP1; Provisional
    sd00006
    Location:85 → 113
    TPR; TPR repeat [structural motif]
    pfam16546
    Location:5 → 64
    SGTA_dimer; Homodimerization domain of SGTA

  2. XM_015140131.2 → XP_014995617.1  small glutamine-rich tetratricopeptide repeat-containing protein beta isoform X2

    UniProtKB/TrEMBL
    F6WDT2
    Conserved Domains (3) summary
    PLN03088
    Location:85 → 233
    PLN03088; SGT1, suppressor of G2 allele of SKP1; Provisional
    sd00006
    Location:85 → 113
    TPR; TPR repeat [structural motif]
    pfam16546
    Location:5 → 64
    SGTA_dimer; Homodimerization domain of SGTA

  3. XM_015140129.2 → XP_014995615.1  small glutamine-rich tetratricopeptide repeat-containing protein beta isoform X1

    UniProtKB/TrEMBL
    A0A1D5Q4A9, A0A8J8XVG6, F6WDT2, G7MU68
    Related
    ENSMMUP00000021710.4, ENSMMUT00000023205.4
    Conserved Domains (3) summary
    PLN03088
    Location:85 → 237
    PLN03088; SGT1, suppressor of G2 allele of SKP1; Provisional
    sd00006
    Location:85 → 113
    TPR; TPR repeat [structural motif]
    pfam16546
    Location:5 → 64
    SGTA_dimer; Homodimerization domain of SGTA

  4. XM_015140130.2 → XP_014995616.1  small glutamine-rich tetratricopeptide repeat-containing protein beta isoform X1

    UniProtKB/TrEMBL
    A0A1D5Q4A9, A0A8J8XVG6, F6WDT2, G7MU68
    Conserved Domains (3) summary
    PLN03088
    Location:85 → 237
    PLN03088; SGT1, suppressor of G2 allele of SKP1; Provisional
    sd00006
    Location:85 → 113
    TPR; TPR repeat [structural motif]
    pfam16546
    Location:5 → 64
    SGTA_dimer; Homodimerization domain of SGTA
Nucleotide Protein
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