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TRAF3IP1 TRAF3 interacting protein 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 696594, updated on 17-Aug-2024

Summary

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Official Symbol
TRAF3IP1provided by VGNC
Official Full Name
TRAF3 interacting protein 1provided by VGNC
Primary source
VGNC:VGNC:79097
See related
Ensembl:ENSMMUG00000010080
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See TRAF3IP1 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
18
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 12 NC_041765.1 (125725767..125808480)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 12 NC_027904.1 (121058936..121138460)

Chromosome 12 - NC_041765.1Genomic Context describing neighboring genes Neighboring gene period circadian regulator 2 Neighboring gene uncharacterized LOC106992784 Neighboring gene uncharacterized LOC106992786 Neighboring gene U6 spliceosomal RNA Neighboring gene ankyrin repeat and SOCS box containing 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables microtubule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intraciliary transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of microtubule cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in axoneme IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in centrosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ciliary basal body IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of intraciliary transport particle B IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TRAF3-interacting protein 1
Names
TNF receptor-associated factor 3 interacting protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041765.1 Reference Mmul_10 Primary Assembly

    Range
    125725767..125808480
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001087072.4 → XP_001087072.1  TRAF3-interacting protein 1 isoform X3

    See identical proteins and their annotated locations for XP_001087072.1

    UniProtKB/TrEMBL
    F6SZX7
    Conserved Domains (1) summary
    pfam10243
    Location:49 → 685
    MIP-T3; Microtubule-binding protein MIP-T3

  2. XM_015111480.2 → XP_014966966.1  TRAF3-interacting protein 1 isoform X4

    UniProtKB/TrEMBL
    G7N9A9
    Conserved Domains (1) summary
    pfam10243
    Location:5 → 675
    MIP-T3; Microtubule-binding protein MIP-T3

  3. XM_002799101.3 → XP_002799147.1  TRAF3-interacting protein 1 isoform X7

    See identical proteins and their annotated locations for XP_002799147.1

    UniProtKB/TrEMBL
    A0A5F7ZD05, H9Z7K2
    Related
    ENSMMUP00000062486.1, ENSMMUT00000093124.1
    Conserved Domains (1) summary
    pfam10243
    Location:49 → 619
    MIP-T3; Microtubule-binding protein MIP-T3

  4. XM_015111478.2 → XP_014966964.1  TRAF3-interacting protein 1 isoform X1

    UniProtKB/TrEMBL
    F6SZX7
    Conserved Domains (1) summary
    pfam10243
    Location:49 → 719
    MIP-T3; Microtubule-binding protein MIP-T3

  5. XM_015111482.2 → XP_014966968.1  TRAF3-interacting protein 1 isoform X6

    UniProtKB/TrEMBL
    F6SZX7
    Conserved Domains (1) summary
    pfam10243
    Location:49 → 653
    MIP-T3; Microtubule-binding protein MIP-T3

  6. XM_015111479.2 → XP_014966965.1  TRAF3-interacting protein 1 isoform X2

    UniProtKB/TrEMBL
    F6SZX7
    Conserved Domains (1) summary
    pfam10243
    Location:49 → 695
    MIP-T3; Microtubule-binding protein MIP-T3

  7. XM_028831293.1 → XP_028687126.1  TRAF3-interacting protein 1 isoform X8

    UniProtKB/TrEMBL
    A0A1D5QSA4, A0A5F7ZD05
    Related
    ENSMMUP00000050932.2, ENSMMUT00000068490.2
    Conserved Domains (1) summary
    pfam10243
    Location:49 → 595
    MIP-T3; Microtubule-binding protein MIP-T3

  8. XM_015111481.2 → XP_014966967.1  TRAF3-interacting protein 1 isoform X5

    UniProtKB/TrEMBL
    F6SZX7
    Related
    ENSMMUP00000013180.4, ENSMMUT00000014074.4
    Conserved Domains (1) summary
    pfam10243
    Location:49 → 671
    MIP-T3; Microtubule-binding protein MIP-T3
Nucleotide Protein
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