U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

PELI1 pellino E3 ubiquitin protein ligase 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 696416, updated on 17-Aug-2024

Summary

Go to the top of the page Help
Official Symbol
PELI1provided by VGNC
Official Full Name
pellino E3 ubiquitin protein ligase 1provided by VGNC
Primary source
VGNC:VGNC:106195
Locus tag
EGK_05378
See related
Ensembl:ENSMMUG00000059267
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See PELI1 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
9
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 13 NC_041766.1 (44623390..44690236)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 13 NC_027905.1 (64966647..65032507, complement)

Chromosome 13 - NC_041766.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114671954 Neighboring gene 60S ribosomal protein L6 pseudogene Neighboring gene uncharacterized LOC106992986 Neighboring gene VPS54 subunit of GARP complex Neighboring gene UDP-glucose pyrophosphorylase 2

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
  2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein K48-linked ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of Toll signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
E3 ubiquitin-protein ligase pellino homolog 1
Names
pellino homolog 1
protein pellino homolog 1
NP_001247881.1
XP_028687273.1
XP_028687274.1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001260952.1 → NP_001247881.1  E3 ubiquitin-protein ligase pellino homolog 1

    See identical proteins and their annotated locations for NP_001247881.1

    Status: PROVISIONAL

    Source sequence(s)
    JV045492
    UniProtKB/TrEMBL
    A0A8J8YJU9, F7DKJ6, G7NA65
    Related
    ENSMMUP00000072501.1, ENSMMUT00000079856.1
    Conserved Domains (1) summary
    pfam04710
    Location:10 → 418
    Pellino

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041766.1 Reference Mmul_10 Primary Assembly

    Range
    44623390..44690236
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028831440.1 → XP_028687273.1  E3 ubiquitin-protein ligase pellino homolog 1 isoform X1

    UniProtKB/TrEMBL
    A0A8J8YJU9, F7DKJ6, G7NA65
    Related
    ENSMMUP00000078335.1, ENSMMUT00000102801.1
    Conserved Domains (1) summary
    pfam04710
    Location:10 → 418
    Pellino

  2. XM_028831441.1 → XP_028687274.1  E3 ubiquitin-protein ligase pellino homolog 1 isoform X1

    UniProtKB/TrEMBL
    A0A8J8YJU9, F7DKJ6, G7NA65
    Conserved Domains (1) summary
    pfam04710
    Location:10 → 418
    Pellino
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.