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FANK1 fibronectin type III and ankyrin repeat domains 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 696281, updated on 17-Aug-2024

Summary

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Official Symbol
FANK1provided by VGNC
Official Full Name
fibronectin type III and ankyrin repeat domains 1provided by VGNC
Primary source
VGNC:VGNC:72559
See related
Ensembl:ENSMMUG00000009655
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See FANK1 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
12
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 9 NC_041762.1 (126330741..126452142)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 9 NC_027901.1 (121911904..122033820)

Chromosome 9 - NC_041762.1Genomic Context describing neighboring genes Neighboring gene BRCA2 and CDKN1A interacting protein Neighboring gene U2 spliceosomal RNA Neighboring gene DEAH-box helicase 32 (putative) Neighboring gene guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-10 pseudogene Neighboring gene ADAM metallopeptidase domain 12 Neighboring gene uncharacterized LOC107000308 Neighboring gene uncharacterized LOC114670067 Neighboring gene microRNA mir-7202

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
fibronectin type 3 and ankyrin repeat domains protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041762.1 Reference Mmul_10 Primary Assembly

    Range
    126330741..126452142
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015148443.2 → XP_015003929.1  fibronectin type 3 and ankyrin repeat domains protein 1 isoform X5

    Conserved Domains (4) summary
    smart00060
    Location:9 → 93
    FN3; Fibronectin type 3 domain
    COG0666
    Location:110 → 316
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:143 → 174
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:148 → 240
    Ank_2; Ankyrin repeats (3 copies)

  2. XM_015148441.2 → XP_015003927.1  fibronectin type 3 and ankyrin repeat domains protein 1 isoform X1

    Conserved Domains (5) summary
    smart00060
    Location:9 → 93
    FN3; Fibronectin type 3 domain
    cd00204
    Location:138 → 298
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:148 → 240
    Ank_2; Ankyrin repeats (3 copies)
    pfam13637
    Location:113 → 164
    Ank_4; Ankyrin repeats (many copies)
    sd00045
    Location:176 → 207
    ANK; ANK repeat [structural motif]

  3. XM_001087611.4 → XP_001087611.1  fibronectin type 3 and ankyrin repeat domains protein 1 isoform X3

    See identical proteins and their annotated locations for XP_001087611.1

    UniProtKB/TrEMBL
    F6YJ78, G7N1D3
    Related
    ENSMMUP00000061930.1, ENSMMUT00000086457.1
    Conserved Domains (4) summary
    smart00060
    Location:9 → 93
    FN3; Fibronectin type 3 domain
    cd00204
    Location:171 → 298
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:176 → 207
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:114 → 207
    Ank_2; Ankyrin repeats (3 copies)

  4. XM_001087857.4 → XP_001087857.1  fibronectin type 3 and ankyrin repeat domains protein 1 isoform X6

    See identical proteins and their annotated locations for XP_001087857.1

    UniProtKB/TrEMBL
    G7N1D3
    Conserved Domains (4) summary
    smart00060
    Location:9 → 93
    FN3; Fibronectin type 3 domain
    sd00045
    Location:143 → 174
    ANK; ANK repeat [structural motif]
    pfam00023
    Location:244 → 276
    Ank; Ankyrin repeat
    pfam12796
    Location:148 → 240
    Ank_2; Ankyrin repeats (3 copies)

  5. XM_028826992.1 → XP_028682825.1  fibronectin type 3 and ankyrin repeat domains protein 1 isoform X2

    UniProtKB/TrEMBL
    F6YJ70
    Related
    ENSMMUP00000012632.4, ENSMMUT00000013483.4
    Conserved Domains (4) summary
    smart00060
    Location:9 → 93
    FN3; Fibronectin type 3 domain
    sd00045
    Location:155 → 185
    ANK; ANK repeat [structural motif]
    pfam13637
    Location:155 → 208
    Ank_4; Ankyrin repeats (many copies)
    pfam12796
    Location:192 → 286
    Ank_2; Ankyrin repeats (3 copies)

  6. XM_028826993.1 → XP_028682826.1  fibronectin type 3 and ankyrin repeat domains protein 1 isoform X4

    Conserved Domains (4) summary
    cd00063
    Location:12 → 49
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    sd00045
    Location:121 → 152
    ANK; ANK repeat [structural motif]
    pfam13637
    Location:56 → 109
    Ank_4; Ankyrin repeats (many copies)
    pfam12796
    Location:93 → 185
    Ank_2; Ankyrin repeats (3 copies)
Nucleotide Protein
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