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alcR alcaligin siderophore biosynthesis transcriptional regulator AlcR [ Bordetella pertussis ]

Gene ID: 69602360, updated on 29-Mar-2024

Summary

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Gene symbol
alcR
Gene description
alcaligin siderophore biosynthesis transcriptional regulator AlcR
Locus tag
CXD86_RS12700
Gene type
protein coding
Organism
Bordetella pertussis (strain: H640, nat-host: Homo sapiens)
Lineage
Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella
Old locus tag
CXD86_12635
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Genomic context

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NZ_CP025371.1Genomic Context describing neighboring genes Neighboring gene alcaligin biosynthesis protein AlcC Neighboring gene alcaligin biosynthesis protein AlcD Neighboring gene alcaligin biosynthesis hydroxylase AlcE Neighboring gene alcaligin export MFS transporter Bcr Neighboring gene TonB-dependent alcaligin siderophore receptor FauA

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP025371.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification and characterization of alcR, a gene encoding an AraC-like regulator of alcaligin siderophore biosynthesis and transport in Bordetella pertussis and Bordetella bronchiseptica. Beaumont FC, et al. J Bacteriol, 1998 Feb. PMID 9473040, Free PMC Article
  2. Identification of AlcR, an AraC-type regulator of alcaligin siderophore synthesis in Bordetella bronchiseptica and Bordetella pertussis. Pradel E, et al. J Bacteriol, 1998 Feb. PMID 9473041, Free PMC Article
  3. The History of Bordetella pertussis Genome Evolution Includes Structural Rearrangement. Weigand MR, et al. J Bacteriol, 2017 Apr 15. PMID 28167525, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
alcaligin siderophore biosynthesis transcriptional regulator AlcR

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP025371.1 Reference assembly

    Range
    2602574..2603548
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_003814017.1 MULTISPECIES: alcaligin siderophore biosynthesis transcriptional regulator AlcR [Bordetella]

    See identical proteins and their annotated locations for WP_003814017.1

    UniProtKB/TrEMBL
    A0A0C6P9W9, O52066, Q79GN0
    Conserved Domains (1) summary
    smart00342
    Location:242 → 323
    HTH_ARAC; helix_turn_helix, arabinose operon control protein
Nucleotide Protein
Heading Accession and Version

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