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SNRPB2 small nuclear ribonucleoprotein polypeptide B2 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 695387, updated on 17-Aug-2024

Summary

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Official Symbol
SNRPB2provided by VGNC
Official Full Name
small nuclear ribonucleoprotein polypeptide B2provided by VGNC
Primary source
VGNC:VGNC:108058
Locus tag
EGK_02687
See related
Ensembl:ENSMMUG00000061754
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See SNRPB2 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
7
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 10 NC_041763.1 (49744656..49756512, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 10 NC_027902.1 (49912086..49923946)

Chromosome 10 - NC_041763.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107000477 Neighboring gene uncharacterized LOC114670316 Neighboring gene otoraplin Neighboring gene uncharacterized LOC107000476 Neighboring gene kinesin family member 16B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
  2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables U1 snRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of U1 snRNP IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
U2 small nuclear ribonucleoprotein B''
Names
small nuclear ribonucleoprotein polypeptide B''

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001260894.1 → NP_001247823.1  U2 small nuclear ribonucleoprotein B''

    See identical proteins and their annotated locations for NP_001247823.1

    Status: PROVISIONAL

    Source sequence(s)
    JV044849
    UniProtKB/TrEMBL
    A0A8J8Y9P1, F7GH69, G7N305
    Conserved Domains (2) summary
    cd12481
    Location:146 → 225
    RRM2_U2B; RNA recognition motif 2 (RRM2) found in vertebrate U2 small nuclear ribonucleoprotein B" (U2B")
    cd12478
    Location:6 → 96
    RRM1_U2B; RNA recognition motif 1 in U2 small nuclear ribonucleoprotein B" (U2B") and similar proteins

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041763.1 Reference Mmul_10 Primary Assembly

    Range
    49744656..49756512 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015149346.2 → XP_015004832.1  U2 small nuclear ribonucleoprotein B'' isoform X1

    UniProtKB/TrEMBL
    A0A8J8Y9P1, F7GH69, G7N305
    Related
    ENSMMUP00000075279.1, ENSMMUT00000100976.1
    Conserved Domains (2) summary
    cd12481
    Location:146 → 225
    RRM2_U2B; RNA recognition motif 2 (RRM2) found in vertebrate U2 small nuclear ribonucleoprotein B" (U2B")
    cd12478
    Location:6 → 96
    RRM1_U2B; RNA recognition motif 1 in U2 small nuclear ribonucleoprotein B" (U2B") and similar proteins
Nucleotide Protein
Heading Accession and Version

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