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rsfS ribosome silencing factor [ Bacteroides xylanisolvens ]

Gene ID: 69483568, updated on 9-Jan-2025

Summary

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Gene symbol
rsfS
Gene description
ribosome silencing factor
Locus tag
INE92_RS24460
Gene type
protein coding
Organism
Bacteroides xylanisolvens (strain: CL11T00C03, nat-host: Homo sapiens)
Lineage
Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides
Old locus tag
INE92_04872
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Genomic context

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NZ_CP072216.1Genomic Context describing neighboring genes Neighboring gene phosphatidate cytidylyltransferase Neighboring gene ATP-dependent zinc metalloprotease FtsH Neighboring gene tRNA-Gln Neighboring gene DUF349 domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP072216.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Mapping of promoters for the nucleus-encoded plastid RNA polymerase (NEP) in the iojap maize mutant. Silhavy D, et al. Curr Genet, 1998 May. PMID 9618584
  2. C7orf30 specifically associates with the large subunit of the mitochondrial ribosome and is involved in translation. Wanschers BF, et al. Nucleic Acids Res, 2012 May. PMID 22238375, Free PMC Article
  3. RsfA (YbeB) proteins are conserved ribosomal silencing factors. Häuser R, et al. PLoS Genet, 2012. PMID 22829778, Free PMC Article
  4. Identification of novel Escherichia coli ribosome-associated proteins using isobaric tags and multidimensional protein identification techniques. Jiang M, et al. J Bacteriol, 2007 May. PMID 17337586, Free PMC Article
  5. Mobile Type VI secretion system loci of the gut Bacteroidales display extensive intra-ecosystem transfer, multi-species spread and geographical clustering. García-Bayona L, et al. PLoS Genet, 2021 Apr. PMID 33901198, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
ribosome silencing factor

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP072216.1 Reference assembly

    Range
    5966233..5966592 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_004310984.1 MULTISPECIES: ribosome silencing factor [Bacteroides]

    See identical proteins and their annotated locations for WP_004310984.1

    UniProtKB/TrEMBL
    A0A0J9ICF2, A0A139L711, A0A174DMD4, A0A372Z187, A0A3A5QBT7, A0A3A5TML8, A0A9E0ZC39, D0TUM3, D4VF62, D6D139, F7M3D6, I9ALK7
    Conserved Domains (1) summary
    pfam02410
    Location:9 → 107
    RsfS; Ribosomal silencing factor during starvation
Nucleotide Protein
Heading Accession and Version