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DCAF13 DDB1 and CUL4 associated factor 13 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 694489, updated on 5-Mar-2024

Summary

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Gene symbol
DCAF13
Gene description
DDB1 and CUL4 associated factor 13
See related
Ensembl:ENSMMUG00000019405
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See DCAF13 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
11
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 8 NC_041761.1 (103692316..103719464)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 8 NC_027900.1 (102151050..102178031)

Chromosome 8 - NC_041761.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene collagen triple helix repeat containing 1 Neighboring gene uncharacterized LOC114680317 Neighboring gene solute carrier family 25 member 32 Neighboring gene mediator of RNA polymerase II transcription subunit 21 pseudogene Neighboring gene U6 spliceosomal RNA Neighboring gene regulating synaptic membrane exocytosis 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of small-subunit processome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DDB1- and CUL4-associated factor 13

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041761.1 Reference Mmul_10 Primary Assembly

    Range
    103692316..103719464
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028852851.1 → XP_028708684.1  DDB1- and CUL4-associated factor 13

    UniProtKB/TrEMBL
    H9F6A3
    Related
    ENSMMUP00000025499.4, ENSMMUT00000027256.4
    Conserved Domains (3) summary
    cd00200
    Location:137 → 431
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:148 → 185
    7WD40; WD40 repeat [structural motif]
    pfam04158
    Location:433 → 516
    Sof1; Sof1-like domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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