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NABP1 nucleic acid binding protein 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 694172, updated on 17-Aug-2024

Summary

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Official Symbol
NABP1provided by VGNC
Official Full Name
nucleic acid binding protein 1provided by VGNC
Primary source
VGNC:VGNC:75025
Locus tag
EGK_04635
See related
Ensembl:ENSMMUG00000009460
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Also known as
OBFC2A
Orthologs
human mouse all
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Genomic context

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See NABP1 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
7
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 12 NC_041765.1 (78910185..78923998)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 12 NC_027904.1 (79308466..79322290)

Chromosome 12 - NC_041765.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106992676 Neighboring gene uncharacterized LOC114671382 Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC106992678 Neighboring gene caveolae associated protein 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
  2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in double-strand break repair via homologous recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic cell cycle checkpoint signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to ionizing radiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SOSS complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
SOSS complex subunit B2
Names
oligonucleotide/oligosaccharide-binding fold containing 2A

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001261728.1 → NP_001248657.1  SOSS complex subunit B2

    See identical proteins and their annotated locations for NP_001248657.1

    Status: PROVISIONAL

    Source sequence(s)
    JV044207
    UniProtKB/TrEMBL
    A0A5F8A2U2, A0A8J8Y1A5, F7A9D1, G7N8J1
    Related
    ENSMMUP00000012371.3, ENSMMUT00000013200.4
    Conserved Domains (1) summary
    cd04491
    Location:22 → 99
    SoSSB_OBF; SoSSB_OBF: A subfamily of OB folds similar to the OB fold of the crenarchaeote Sulfolobus solfataricus single-stranded (ss) DNA-binding protein (SSoSSB). SSoSSB has a single OB fold, and it physically and functionally interacts with RNA polymerase. In ...

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041765.1 Reference Mmul_10 Primary Assembly

    Range
    78910185..78923998
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015110575.2 → XP_014966061.1  SOSS complex subunit B2 isoform X2

  2. XM_015110573.2 → XP_014966059.1  SOSS complex subunit B2 isoform X1

    UniProtKB/TrEMBL
    A0A5F8A2U2, A0A8J8Y1A5, F7A9D1, G7N8J1
    Related
    ENSMMUP00000071216.1, ENSMMUT00000086455.1
    Conserved Domains (1) summary
    cd04491
    Location:22 → 99
    SoSSB_OBF; SoSSB_OBF: A subfamily of OB folds similar to the OB fold of the crenarchaeote Sulfolobus solfataricus single-stranded (ss) DNA-binding protein (SSoSSB). SSoSSB has a single OB fold, and it physically and functionally interacts with RNA polymerase. In ...

RNA

  1. XR_003721142.1 RNA Sequence

  2. XR_003721143.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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