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TET2 tet methylcytosine dioxygenase 2 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 694137, updated on 18-Sep-2024

Summary

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Official Symbol
TET2provided by VGNC
Official Full Name
tet methylcytosine dioxygenase 2provided by VGNC
Primary source
VGNC:VGNC:100278
See related
Ensembl:ENSMMUG00000017831
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See TET2 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
13
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 5 NC_041758.1 (103636034..103768093)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 5 NC_027897.1 (105087660..105220083, complement)

Chromosome 5 - NC_041758.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene nucleoporin Nup43 pseudogene Neighboring gene inorganic pyrophosphatase 2 Neighboring gene protein PIMREG pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 5-methylcytosine dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in myeloid cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in oxidative demethylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
methylcytosine dioxygenase TET2
Names
tet oncogene family member 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041758.1 Reference Mmul_10 Primary Assembly

    Range
    103636034..103768093
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015138929.2 → XP_014994415.2  methylcytosine dioxygenase TET2

    UniProtKB/TrEMBL
    F7DR39, F7DR47, G7MTJ8
    Conserved Domains (1) summary
    pfam12851
    Location:1288 → 1415
    Tet_JBP; Oxygenase domain of the 2OGFeDO superfamily

  2. XM_015138928.2 → XP_014994414.2  methylcytosine dioxygenase TET2

    UniProtKB/TrEMBL
    F7DR39, F7DR47, G7MTJ8
    Related
    ENSMMUP00000023440.4, ENSMMUT00000025055.4
    Conserved Domains (1) summary
    pfam12851
    Location:1288 → 1415
    Tet_JBP; Oxygenase domain of the 2OGFeDO superfamily

  3. XM_028848654.1 → XP_028704487.1  methylcytosine dioxygenase TET2

    UniProtKB/TrEMBL
    F7DR39, F7DR47, G7MTJ8
    Related
    ENSMMUP00000023441.3, ENSMMUT00000025056.3
    Conserved Domains (1) summary
    pfam12851
    Location:1288 → 1415
    Tet_JBP; Oxygenase domain of the 2OGFeDO superfamily

  4. XM_015138927.2 → XP_014994413.2  methylcytosine dioxygenase TET2

    UniProtKB/TrEMBL
    F7DR39, F7DR47, G7MTJ8
    Conserved Domains (1) summary
    pfam12851
    Location:1288 → 1415
    Tet_JBP; Oxygenase domain of the 2OGFeDO superfamily
Nucleotide Protein
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