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IKZF1 IKAROS family zinc finger 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 693936, updated on 17-Aug-2024

Summary

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Official Symbol
IKZF1provided by VGNC
Official Full Name
IKAROS family zinc finger 1provided by VGNC
Primary source
VGNC:VGNC:73585
See related
Ensembl:ENSMMUG00000000504
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Also known as
ZNFN1A1
Orthologs
human mouse all
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Genomic context

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See IKZF1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
12
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 3 NC_041756.1 (64871690..64973685, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 3 NC_027895.1 (58276798..58326594, complement)

Chromosome 3 - NC_041756.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene fidgetin like 1 Neighboring gene sperm microtubule inner protein 7 Neighboring gene zona pellucida binding protein Neighboring gene nucleolar GTP-binding protein 2 pseudogene Neighboring gene von Willebrand factor C domain containing 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA-binding protein Ikaros
Names
zinc finger protein, subfamily 1A, 1 (Ikaros)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041756.1 Reference Mmul_10 Primary Assembly

    Range
    64871690..64973685 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028845776.1 → XP_028701609.1  DNA-binding protein Ikaros isoform X7

    UniProtKB/TrEMBL
    A0A5F8AED3, G7MLB0
    Related
    ENSMMUP00000076243.1, ENSMMUT00000087995.1
    Conserved Domains (2) summary
    COG5048
    Location:1 → 131
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:60 → 80
    ZF_C2H2; C2H2 Zn finger [structural motif]

  2. XM_028845777.1 → XP_028701610.1  DNA-binding protein Ikaros isoform X8

    UniProtKB/TrEMBL
    G7MLB0
    Conserved Domains (2) summary
    COG5048
    Location:1 → 131
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:60 → 80
    ZF_C2H2; C2H2 Zn finger [structural motif]

  3. XM_028845774.1 → XP_028701607.1  DNA-binding protein Ikaros isoform X7

    UniProtKB/TrEMBL
    A0A5F8AED3, G7MLB0
    Related
    ENSMMUP00000000691.3, ENSMMUT00000000745.4
    Conserved Domains (2) summary
    COG5048
    Location:1 → 131
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:60 → 80
    ZF_C2H2; C2H2 Zn finger [structural motif]

  4. XM_028845770.1 → XP_028701603.1  DNA-binding protein Ikaros isoform X3

    UniProtKB/TrEMBL
    F6YC72, G7MLB0
    Related
    ENSMMUP00000062160.1, ENSMMUT00000080711.1
    Conserved Domains (2) summary
    sd00017
    Location:119 → 139
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:132 → 156
    zf-H2C2_2; Zinc-finger double domain

  5. XM_028845773.1 → XP_028701606.1  DNA-binding protein Ikaros isoform X6

    UniProtKB/TrEMBL
    G7MLB0
    Conserved Domains (3) summary
    sd00017
    Location:80 → 100
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:78 → 100
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:92 → 117
    zf-H2C2_2; Zinc-finger double domain

  6. XM_015133500.2 → XP_014988986.2  DNA-binding protein Ikaros isoform X2

    UniProtKB/TrEMBL
    G7MLB0
    Conserved Domains (3) summary
    COG5048
    Location:163 → 505
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:139 → 159
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:152 → 176
    zf-H2C2_2; Zinc-finger double domain

  7. XM_028845767.1 → XP_028701600.1  DNA-binding protein Ikaros isoform X1

    UniProtKB/TrEMBL
    G7MLB0
    Conserved Domains (2) summary
    sd00017
    Location:139 → 159
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:152 → 176
    zf-H2C2_2; Zinc-finger double domain

  8. XM_028845769.1 → XP_028701602.1  DNA-binding protein Ikaros isoform X1

    UniProtKB/TrEMBL
    G7MLB0
    Conserved Domains (2) summary
    sd00017
    Location:139 → 159
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:152 → 176
    zf-H2C2_2; Zinc-finger double domain

  9. XM_028845771.1 → XP_028701604.1  DNA-binding protein Ikaros isoform X3

    UniProtKB/TrEMBL
    F6YC72, G7MLB0
    Related
    ENSMMUP00000035299.1, ENSMMUT00000042300.3
    Conserved Domains (2) summary
    sd00017
    Location:119 → 139
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:132 → 156
    zf-H2C2_2; Zinc-finger double domain

  10. XM_028845775.1 → XP_028701608.1  DNA-binding protein Ikaros isoform X7

    UniProtKB/TrEMBL
    A0A5F8AED3, G7MLB0
    Conserved Domains (2) summary
    COG5048
    Location:1 → 131
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:60 → 80
    ZF_C2H2; C2H2 Zn finger [structural motif]

  11. XM_028845768.1 → XP_028701601.1  DNA-binding protein Ikaros isoform X1

    UniProtKB/TrEMBL
    G7MLB0
    Conserved Domains (2) summary
    sd00017
    Location:139 → 159
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:152 → 176
    zf-H2C2_2; Zinc-finger double domain

  12. XM_028845772.1 → XP_028701605.1  DNA-binding protein Ikaros isoform X5

    UniProtKB/TrEMBL
    F6YC56, G7MLB0
    Related
    ENSMMUP00000000687.3, ENSMMUT00000000741.4
    Conserved Domains (3) summary
    COG5048
    Location:97 → 253
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:73 → 93
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:86 → 110
    zf-H2C2_2; Zinc-finger double domain

  13. XM_015133507.2 → XP_014988993.1  DNA-binding protein Ikaros isoform X9

    Conserved Domains (4) summary
    COG5048
    Location:31 → 105
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:34 → 54
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:32 → 54
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:46 → 71
    zf-H2C2_2; Zinc-finger double domain

  14. XM_015133503.2 → XP_014988989.1  DNA-binding protein Ikaros isoform X4

    UniProtKB/TrEMBL
    G7MLB0
    Conserved Domains (3) summary
    COG5048
    Location:117 → 273
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:93 → 113
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:106 → 130
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
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