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TMC7 transmembrane channel like 7 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 693807, updated on 17-Aug-2024

Summary

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Official Symbol
TMC7provided by VGNC
Official Full Name
transmembrane channel like 7provided by VGNC
Primary source
VGNC:VGNC:79367
Locus tag
EGK_12550
See related
Ensembl:ENSMMUG00000006911
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See TMC7 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
17
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 20 NC_041773.1 (17819448..17888135)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 20 NC_027912.1 (18138882..18208092)

Chromosome 20 - NC_041773.1Genomic Context describing neighboring genes Neighboring gene SMG1 nonsense mediated mRNA decay associated PI3K related kinase Neighboring gene small nucleolar RNA U13 Neighboring gene histone chaperone ASF1-like Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC114674480 Neighboring gene uncharacterized LOC114674481 Neighboring gene coenzyme Q7, hydroxylase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
  2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mechanosensitive monoatomic ion channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane channel-like protein 7

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001257826.1 → NP_001244755.1  transmembrane channel-like protein 7

    See identical proteins and their annotated locations for NP_001244755.1

    Status: PROVISIONAL

    Source sequence(s)
    JU322627
    UniProtKB/TrEMBL
    A0A5F8AU22, A0A8J8YGH2, F6QV35, G7NPR8
    Related
    ENSMMUP00000063342.1, ENSMMUT00000097484.1
    Conserved Domains (1) summary
    pfam07810
    Location:491 → 593
    TMC; TMC domain

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041773.1 Reference Mmul_10 Primary Assembly

    Range
    17819448..17888135
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028840352.1 → XP_028696185.1  transmembrane channel-like protein 7 isoform X1

    UniProtKB/TrEMBL
    F7EZG5
    Conserved Domains (1) summary
    pfam07810
    Location:376 → 487
    TMC; TMC domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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