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ABCA5 ATP binding cassette subfamily A member 5 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 693795, updated on 17-Aug-2024

Summary

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Official Symbol
ABCA5provided by VGNC
Official Full Name
ATP binding cassette subfamily A member 5provided by VGNC
Primary source
VGNC:VGNC:99109
See related
Ensembl:ENSMMUG00000018608
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See ABCA5 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
40
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 16 NC_041769.1 (65555756..65636046, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 16 NC_027908.1 (62651423..62732654, complement)

Chromosome 16 - NC_041769.1Genomic Context describing neighboring genes Neighboring gene ATP binding cassette subfamily A member 6 Neighboring gene ATP binding cassette subfamily A member 10 Neighboring gene small nuclear ribonucleoprotein G pseudogene Neighboring gene uncharacterized LOC106994114 Neighboring gene small nucleolar RNA SNORA40

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ABC-type transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables lipid transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP-binding cassette sub-family A member 5
Names
ATP-binding cassette, sub-family A (ABC1), member 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041769.1 Reference Mmul_10 Primary Assembly

    Range
    65555756..65636046 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015120205.2 → XP_014975691.2  ATP-binding cassette sub-family A member 5 isoform X1

    UniProtKB/TrEMBL
    F6Y6L4, H9FS39
    Conserved Domains (1) summary
    TIGR01257
    Location:107 → 1618
    rim_protein; retinal-specific rim ABC transporter

  2. XM_015120206.2 → XP_014975692.2  ATP-binding cassette sub-family A member 5 isoform X1

    UniProtKB/TrEMBL
    F6Y6L4, H9FS39
    Related
    ENSMMUP00000024484.4, ENSMMUT00000026162.4
    Conserved Domains (1) summary
    TIGR01257
    Location:107 → 1618
    rim_protein; retinal-specific rim ABC transporter

  3. XM_028836732.1 → XP_028692565.1  ATP-binding cassette sub-family A member 5 isoform X2

    Conserved Domains (1) summary
    TIGR01257
    Location:107 → 1581
    rim_protein; retinal-specific rim ABC transporter

RNA

  1. XR_003723850.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials