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DDX60L DExD/H-box 60 like [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 693749, updated on 17-Aug-2024

Summary

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Official Symbol
DDX60Lprovided by VGNC
Official Full Name
DExD/H-box 60 likeprovided by VGNC
Primary source
VGNC:VGNC:71720
See related
Ensembl:ENSMMUG00000003634
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human all
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Genomic context

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See DDX60L in Genome Data Viewer
Location:
chromosome: 5
Exon count:
46
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 5 NC_041758.1 (165667145..165879156, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 5 NC_027897.1 (168573007..168745896, complement)

Chromosome 5 - NC_041758.1Genomic Context describing neighboring genes Neighboring gene annexin A10 Neighboring gene DExD/H-box helicase 60 Neighboring gene small nucleolar RNA U13 Neighboring gene uncharacterized LOC114678426 Neighboring gene small nucleolar RNA SNORA51 Neighboring gene palladin, cytoskeletal associated protein Neighboring gene transcription factor BTF3 homolog 4 pseudogene Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables double-stranded RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables single-stranded RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in defense response to virus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable ATP-dependent RNA helicase DDX60-like
Names
DEAD-box helicase 60 like
XP_014994963.2
XP_014994964.2
XP_014994965.2
XP_014994966.2
XP_014994968.2
XP_014994969.2
XP_028704706.1
XP_028704707.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041758.1 Reference Mmul_10 Primary Assembly

    Range
    165667145..165879156 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015139479.2 → XP_014994965.2  probable ATP-dependent RNA helicase DDX60-like isoform X1

    UniProtKB/TrEMBL
    A0A1D5QED8, A0A5F7Z951, F6Q646
    Conserved Domains (2) summary
    COG4581
    Location:750 → 1368
    Dob10; Superfamily II RNA helicase [Replication, recombination and repair]
    cl28899
    Location:751 → 937
    DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily

  2. XM_028848873.1 → XP_028704706.1  probable ATP-dependent RNA helicase DDX60-like isoform X1

    UniProtKB/TrEMBL
    A0A1D5QED8, A0A5F7Z951, F6Q646
    Conserved Domains (2) summary
    COG4581
    Location:750 → 1368
    Dob10; Superfamily II RNA helicase [Replication, recombination and repair]
    cl28899
    Location:751 → 937
    DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily

  3. XM_015139482.2 → XP_014994968.2  probable ATP-dependent RNA helicase DDX60-like isoform X1

    UniProtKB/TrEMBL
    A0A1D5QED8, A0A5F7Z951, F6Q646
    Related
    ENSMMUP00000046407.2, ENSMMUT00000055171.2
    Conserved Domains (2) summary
    COG4581
    Location:750 → 1368
    Dob10; Superfamily II RNA helicase [Replication, recombination and repair]
    cl28899
    Location:751 → 937
    DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily

  4. XM_015139478.2 → XP_014994964.2  probable ATP-dependent RNA helicase DDX60-like isoform X1

    UniProtKB/TrEMBL
    A0A1D5QED8, A0A5F7Z951, F6Q646
    Related
    ENSMMUP00000004850.4, ENSMMUT00000005148.4
    Conserved Domains (2) summary
    COG4581
    Location:750 → 1368
    Dob10; Superfamily II RNA helicase [Replication, recombination and repair]
    cl28899
    Location:751 → 937
    DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily

  5. XM_015139480.2 → XP_014994966.2  probable ATP-dependent RNA helicase DDX60-like isoform X1

    UniProtKB/TrEMBL
    A0A1D5QED8, A0A5F7Z951, F6Q646
    Conserved Domains (2) summary
    COG4581
    Location:750 → 1368
    Dob10; Superfamily II RNA helicase [Replication, recombination and repair]
    cl28899
    Location:751 → 937
    DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily

  6. XM_028848874.1 → XP_028704707.1  probable ATP-dependent RNA helicase DDX60-like isoform X1

    UniProtKB/TrEMBL
    A0A1D5QED8, A0A5F7Z951, F6Q646
    Conserved Domains (2) summary
    COG4581
    Location:750 → 1368
    Dob10; Superfamily II RNA helicase [Replication, recombination and repair]
    cl28899
    Location:751 → 937
    DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily

  7. XM_015139477.2 → XP_014994963.2  probable ATP-dependent RNA helicase DDX60-like isoform X1

    UniProtKB/TrEMBL
    A0A1D5QED8, A0A5F7Z951, F6Q646
    Conserved Domains (2) summary
    COG4581
    Location:750 → 1368
    Dob10; Superfamily II RNA helicase [Replication, recombination and repair]
    cl28899
    Location:751 → 937
    DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily

  8. XM_015139483.2 → XP_014994969.2  probable ATP-dependent RNA helicase DDX60-like isoform X2

    UniProtKB/TrEMBL
    G7MSA4
    Conserved Domains (1) summary
    cl28899
    Location:751 → 937
    DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily

RNA

  1. XR_003729851.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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