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PTP4A3 protein tyrosine phosphatase 4A3 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 693703, updated on 17-Aug-2024

Summary

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Official Symbol
PTP4A3provided by VGNC
Official Full Name
protein tyrosine phosphatase 4A3provided by VGNC
Primary source
VGNC:VGNC:76596
Locus tag
EGK_21284
See related
Ensembl:ENSMMUG00000019392
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See PTP4A3 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
10
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 8 NC_041761.1 (141628336..141672158)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 8 NC_027900.1 (140629559..140674349)

Chromosome 8 - NC_041761.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 45 member 4 Neighboring gene SLC45A4 antisense RNA 1 Neighboring gene G protein-coupled receptor 20 Neighboring gene uncharacterized LOC106999970 Neighboring gene small nucleolar RNA SNORD5 Neighboring gene maestro heat like repeat family member 5 Neighboring gene uncharacterized LOC114680130

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
  2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein tyrosine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endothelial cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein tyrosine phosphatase type IVA 3
Names
protein tyrosine phosphatase type IVA, member 3
NP_001180623.1
XP_015001567.1
XP_015001569.1
XP_015001570.1
XP_015001571.1
XP_028707947.1
XP_028707948.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001193694.2 → NP_001180623.1  protein tyrosine phosphatase type IVA 3

    See identical proteins and their annotated locations for NP_001180623.1

    Status: PROVISIONAL

    Source sequence(s)
    QNVO02000453
    UniProtKB/TrEMBL
    F6T1U3, G8F1I3
    Conserved Domains (1) summary
    cd18535
    Location:5 → 158
    PTP-IVa3; protein tyrosine phosphatase type IVA 3

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041761.1 Reference Mmul_10 Primary Assembly

    Range
    141628336..141672158
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015146084.2 → XP_015001570.1  protein tyrosine phosphatase type IVA 3 isoform X1

    UniProtKB/TrEMBL
    F6T1U3, G8F1I3
    Related
    ENSMMUP00000063220.1, ENSMMUT00000106330.1
    Conserved Domains (1) summary
    cd18535
    Location:5 → 158
    PTP-IVa3; protein tyrosine phosphatase type IVA 3

  2. XM_028852114.1 → XP_028707947.1  protein tyrosine phosphatase type IVA 3 isoform X1

    UniProtKB/TrEMBL
    F6T1U3, G8F1I3
    Conserved Domains (1) summary
    cd18535
    Location:5 → 158
    PTP-IVa3; protein tyrosine phosphatase type IVA 3

  3. XM_015146083.2 → XP_015001569.1  protein tyrosine phosphatase type IVA 3 isoform X1

    UniProtKB/TrEMBL
    F6T1U3, G8F1I3
    Conserved Domains (1) summary
    cd18535
    Location:5 → 158
    PTP-IVa3; protein tyrosine phosphatase type IVA 3

  4. XM_015146081.2 → XP_015001567.1  protein tyrosine phosphatase type IVA 3 isoform X1

    UniProtKB/TrEMBL
    F6T1U3, G8F1I3
    Related
    ENSMMUP00000042913.1, ENSMMUT00000059944.2
    Conserved Domains (1) summary
    cd18535
    Location:5 → 158
    PTP-IVa3; protein tyrosine phosphatase type IVA 3

  5. XM_015146085.2 → XP_015001571.1  protein tyrosine phosphatase type IVA 3 isoform X2

    UniProtKB/TrEMBL
    A0A1D5QJX9
    Related
    ENSMMUP00000048352.1, ENSMMUT00000061827.2
    Conserved Domains (1) summary
    cl28904
    Location:5 → 133
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily

  6. XM_028852115.1 → XP_028707948.1  protein tyrosine phosphatase type IVA 3 isoform X3

    Conserved Domains (1) summary
    cl28904
    Location:1 → 125
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily
Nucleotide Protein
Heading Accession and Version

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