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HTR1F 5-hydroxytryptamine receptor 1F [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 693418, updated on 17-Aug-2024

Summary

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Official Symbol
HTR1Fprovided by VGNC
Official Full Name
5-hydroxytryptamine receptor 1Fprovided by VGNC
Primary source
VGNC:VGNC:111892
See related
Ensembl:ENSMMUG00000054402
Gene type
protein coding
RefSeq status
INFERRED
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See HTR1F in Genome Data Viewer
Location:
chromosome: 2
Exon count:
7
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (184065324..184263405, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (12546323..12744718)

Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene chromobox protein homolog 5 pseudogene Neighboring gene zinc finger protein 654 Neighboring gene CGG triplet repeat binding protein 1 Neighboring gene U6atac minor spliceosomal RNA Neighboring gene U6 spliceosomal RNA Neighboring gene MICOS complex subunit MIC26 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables G protein-coupled serotonin receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables neurotransmitter receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in dendrite IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
5-hydroxytryptamine receptor 1F

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001193683.2 → NP_001180612.2  5-hydroxytryptamine receptor 1F

    Status: INFERRED

    Source sequence(s)
    QNVO02000283
    UniProtKB/TrEMBL
    A0A5F7ZV06, G7MJT7
    Related
    ENSMMUP00000068998.1, ENSMMUT00000080123.1
    Conserved Domains (1) summary
    cd15334
    Location:24 → 359
    7tmA_5-HT1F; serotonin receptor subtype 1F, member of the class A family of seven-transmembrane G protein-coupled receptors

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041755.1 Reference Mmul_10 Primary Assembly

    Range
    184065324..184263405 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028843058.1 → XP_028698891.1  5-hydroxytryptamine receptor 1F isoform X1

    UniProtKB/TrEMBL
    A0A5F7ZV06, G7MJT7
    Conserved Domains (1) summary
    cd15334
    Location:24 → 359
    7tmA_5-HT1F; serotonin receptor subtype 1F, member of the class A family of seven-transmembrane G protein-coupled receptors

  2. XM_028843057.1 → XP_028698890.1  5-hydroxytryptamine receptor 1F isoform X1

    UniProtKB/TrEMBL
    A0A5F7ZV06, G7MJT7
    Conserved Domains (1) summary
    cd15334
    Location:24 → 359
    7tmA_5-HT1F; serotonin receptor subtype 1F, member of the class A family of seven-transmembrane G protein-coupled receptors

  3. XM_028843056.1 → XP_028698889.1  5-hydroxytryptamine receptor 1F isoform X1

    UniProtKB/TrEMBL
    A0A5F7ZV06, G7MJT7
    Conserved Domains (1) summary
    cd15334
    Location:24 → 359
    7tmA_5-HT1F; serotonin receptor subtype 1F, member of the class A family of seven-transmembrane G protein-coupled receptors

  4. XM_028843054.1 → XP_028698887.1  5-hydroxytryptamine receptor 1F isoform X1

    UniProtKB/TrEMBL
    A0A5F7ZV06, G7MJT7
    Conserved Domains (1) summary
    cd15334
    Location:24 → 359
    7tmA_5-HT1F; serotonin receptor subtype 1F, member of the class A family of seven-transmembrane G protein-coupled receptors

  5. XM_015128504.2 → XP_014983990.2  5-hydroxytryptamine receptor 1F isoform X1

    UniProtKB/TrEMBL
    A0A5F7ZV06, G7MJT7
    Conserved Domains (1) summary
    cd15334
    Location:24 → 359
    7tmA_5-HT1F; serotonin receptor subtype 1F, member of the class A family of seven-transmembrane G protein-coupled receptors

  6. XM_028843055.1 → XP_028698888.1  5-hydroxytryptamine receptor 1F isoform X1

    UniProtKB/TrEMBL
    A0A5F7ZV06, G7MJT7
    Conserved Domains (1) summary
    cd15334
    Location:24 → 359
    7tmA_5-HT1F; serotonin receptor subtype 1F, member of the class A family of seven-transmembrane G protein-coupled receptors
Nucleotide Protein
Heading Accession and Version

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