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6030498E09Rikl RIKEN cDNA 6030498E09 gene like [ Rattus norvegicus (Norway rat) ]

Gene ID: 691215, updated on 27-Nov-2024

Summary

Official Symbol
6030498E09Riklprovided by RGD
Official Full Name
RIKEN cDNA 6030498E09 gene likeprovided by RGD
Primary source
RGD:1586289
See related
EnsemblRapid:ENSRNOG00000028189 AllianceGenome:RGD:1586289
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Expression
Restricted expression toward (RPKM 19.4) See more
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Genomic context

See 6030498E09Rikl in Genome Data Viewer
Location:
Xq35
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) X NC_086039.1 (122422749..122621883)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) X NC_051356.1 (117556991..117756327)
106 previous assembly Rnor_6.0 (GCF_000001895.5) X NC_005120.4 (125021832..125319418)

Chromosome X - NC_086039.1Genomic Context describing neighboring genes Neighboring gene C1GALT1-specific chaperone 1 Neighboring gene small nucleolar RNA SNORA17 Neighboring gene ribosomal protein L10A like 2 Neighboring gene small nucleolar RNA SNORA42/SNORA80 family Neighboring gene actin, gamma 1, pseudogene 5

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

General protein information

Preferred Names
uncharacterized protein LOC691215

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001109631.1NP_001103101.1  uncharacterized protein LOC691215

    See identical proteins and their annotated locations for NP_001103101.1

    Status: PREDICTED

    Source sequence(s)
    CH473991
    UniProtKB/TrEMBL
    A6JML1, D3ZUU0
    Related
    ENSRNOP00000032546.4, ENSRNOT00000029193.8

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086039.1 Reference GRCr8

    Range
    122422749..122621883
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063280314.1XP_063136384.1  uncharacterized protein LOC691215 isoform X1

    UniProtKB/TrEMBL
    A6JML1, D3ZUU0