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Girdinl1 girders of actin filaments like 1 [ Rattus norvegicus (Norway rat) ]

Gene ID: 685668, updated on 3-Dec-2024

Summary

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Official Symbol
Girdinl1provided by RGD
Official Full Name
girders of actin filaments like 1provided by RGD
Primary source
RGD:1591345
See related
AllianceGenome:RGD:1591345
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
AABR07066379.1
Expression
Biased expression in Adrenal (RPKM 959.4), Brain (RPKM 670.3) and 1 other tissue See more
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Genomic context

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See Girdinl1 in Genome Data Viewer
Location:
9q12
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 9 NC_086027.1 (18162530..18181711)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 9 NC_051344.1 (10664770..10683943)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 9 NC_005108.4 (12341940..12352007)

Chromosome 9 - NC_086027.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134480538 Neighboring gene uncharacterized LOC134480549 Neighboring gene uncharacterized LOC134480546 Neighboring gene deleted in azoospermia-like Neighboring gene raftlin lipid raft linker 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
uncharacterized protein Girdinl1
Names
disks large homolog 5-like
girdin
inactive phospholipase C-like protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086027.1 Reference GRCr8

    Range
    18162530..18181711
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063268107.1 → XP_063124177.1  uncharacterized protein Girdinl1 isoform X3

  2. XM_039084435.2 → XP_038940363.1  uncharacterized protein Girdinl1 isoform X1

    UniProtKB/TrEMBL
    A0A8I6AH18
    Conserved Domains (1) summary
    pfam04822
    Location:69 → 149
    Takusan

  3. XM_063268108.1 → XP_063124178.1  uncharacterized protein Girdinl1 isoform X5

  4. XM_039084438.2 → XP_038940366.1  uncharacterized protein Girdinl1 isoform X4

    UniProtKB/TrEMBL
    A0A8I5Y7T4
    Conserved Domains (1) summary
    pfam04822
    Location:15 → 95
    Takusan

  5. XM_063268106.1 → XP_063124176.1  uncharacterized protein Girdinl1 isoform X2

    UniProtKB/TrEMBL
    A0A0G2K540, A0A8I6AHA9
Nucleotide Protein Strain
Heading Accession and Version

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