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Erich4 glutamate-rich 4 [ Rattus norvegicus (Norway rat) ]

Gene ID: 685046, updated on 9-Dec-2024

Summary

Official Symbol
Erich4provided by RGD
Official Full Name
glutamate-rich 4provided by RGD
Primary source
RGD:1583255
See related
EnsemblRapid:ENSRNOG00000037798 AllianceGenome:RGD:1583255
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Orthologous to human ERICH4 (glutamate rich 4). [provided by Alliance of Genome Resources, Dec 2024]
Expression
Restricted expression toward (RPKM 154.4) See more
Orthologs
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Genomic context

See Erich4 in Genome Data Viewer
Location:
1q21
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (90251345..90253085, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (81123556..81125296, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (82407899..82409639, complement)

Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120096895 Neighboring gene C-X-C motif chemokine ligand 17 Neighboring gene uncharacterized LOC102549342 Neighboring gene CEA cell adhesion molecule 1 Neighboring gene distal membrane arm assembly component 2 Neighboring gene UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 8 Neighboring gene branched chain keto acid dehydrogenase E1 subunit alpha Neighboring gene exosome component 5

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

General protein information

Preferred Names
glutamate-rich protein 4
Names
uncharacterized protein C19orf69 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001109453.1NP_001102923.1  glutamate-rich protein 4

    See identical proteins and their annotated locations for NP_001102923.1

    Status: PROVISIONAL

    Source sequence(s)
    CH473979
    UniProtKB/Swiss-Prot
    P0C7N2
    UniProtKB/TrEMBL
    A6J969, G3V8X7
    Related
    ENSRNOP00000029967.4, ENSRNOT00000031326.6
    Conserved Domains (1) summary
    pfam15039
    Location:594
    DUF4530; Domain of unknown function (DUF4530)

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086019.1 Reference GRCr8

    Range
    90251345..90253085 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)