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Fam120aos family with sequence similarity 120A, opposite strand [ Mus musculus (house mouse) ]

Gene ID: 68128, updated on 26-Oct-2024

Summary

Official Symbol
Fam120aosprovided by MGI
Official Full Name
family with sequence similarity 120A, opposite strandprovided by MGI
Primary source
MGI:MGI:1915378
See related
AllianceGenome:MGI:1915378
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
C030044B11Rik
Expression
Ubiquitous expression in ovary adult (RPKM 22.0), adrenal adult (RPKM 20.6) and 28 other tissues See more
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Genomic context

See Fam120aos in Genome Data Viewer
Location:
13 A5; 13 25.04 cM
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (49121588..49123381)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (48968112..48969905)

Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene PHD finger protein 2 Neighboring gene CapStarr-seq enhancer MGSCv37_chr13:48940813-48940996 Neighboring gene PHD finger protein 2, opposite strand 1 Neighboring gene family with sequence similarity 120, member A Neighboring gene kinesin family member 11 pseudogene Neighboring gene STARR-seq mESC enhancer starr_34469 Neighboring gene WNK lysine deficient protein kinase 2 Neighboring gene CapStarr-seq enhancer MGSCv37_chr13:49185630-49185783

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_015601.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    BC045201, CJ174269

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000079.7 Reference GRCm39 C57BL/6J

    Range
    49121588..49123381
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)