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1700067P10Rikl RIKEN cDNA 1700067P10 gene like [ Rattus norvegicus (Norway rat) ]

Gene ID: 680955, updated on 4-Jan-2025

Summary

Official Symbol
1700067P10Riklprovided by RGD
Official Full Name
RIKEN cDNA 1700067P10 gene likeprovided by RGD
Primary source
RGD:1585834
See related
AllianceGenome:RGD:1585834
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Predicted to be located in membrane. [provided by Alliance of Genome Resources, Jan 2025]
Expression
Restricted expression toward (RPKM 108.9) See more
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Genomic context

See 1700067P10Rikl in Genome Data Viewer
Location:
9q12
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 9 NC_086027.1 (20392884..20394182, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 9 NC_051344.1 (12895294..12896592, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 9 NC_005108.4 (14904867..14906407, complement)

Chromosome 9 - NC_086027.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120094839 Neighboring gene RGD1565959 Neighboring gene RIKEN cDNA 1700122O11 gene like Neighboring gene uncharacterized LOC134480339

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Interactions

Products Interactant Other Gene Complex Source Pubs Description

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_176810.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000009
  2. NR_176811.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000009
  3. NR_176812.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000009

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086027.1 Reference GRCr8

    Range
    20392884..20394182 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)