U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Rps4x-ps5 ribosomal protein S4, X-linked, pseudogene 5 [ Rattus norvegicus (Norway rat) ]

Gene ID: 680672, updated on 17-Aug-2024

Summary

Go to the top of the page Help
Official Symbol
Rps4x-ps5provided by RGD
Official Full Name
ribosomal protein S4, X-linked, pseudogene 5provided by RGD
Primary source
RGD:1589404
See related
AllianceGenome:RGD:1589404
Gene type
pseudo
RefSeq status
INFERRED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
This locus was determined to be a processed pseudogene of Rps4x (GeneID:100362640) since it has a similar nucleotide sequence to the coding region of the parental gene, but contains no intact open reading frame. Consistent with this locus being a processed pseudogene, it contains only exonic sequences relative to the parental gene. [provided by RefSeq, Apr 2015]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See Rps4x-ps5 in Genome Data Viewer
Location:
10q12
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 10 NC_086028.1 (12945576..12946425, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 10 NC_051345.1 (12440943..12441792, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 10 NC_005109.4 (12780139..12780913, complement)

Chromosome 10 - NC_086028.1Genomic Context describing neighboring genes Neighboring gene olfactory receptor pseudogene 1379 Neighboring gene olfactory receptor family 1 subfamily F member 31 Neighboring gene olfactory receptor family 1 subfamily F member 30 Neighboring gene olfactory receptor family 1 subfamily F member 28

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_042098.1 

    Range
    101..950
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086028.1 Reference GRCr8

    Range
    12945576..12946425 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.