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Ftdc2 ferritin domain containing 2 [ Rattus norvegicus (Norway rat) ]

Gene ID: 680520, updated on 4-Jan-2025

Summary

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Official Symbol
Ftdc2provided by RGD
Official Full Name
ferritin domain containing 2provided by RGD
Primary source
RGD:1590640
See related
EnsemblRapid:ENSRNOG00000027997 AllianceGenome:RGD:1590640
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Predicted to be involved in intracellular iron ion homeostasis and iron ion transport. [provided by Alliance of Genome Resources, Jan 2025]
Expression
Restricted expression toward (RPKM 51.2) See more
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Genomic context

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See Ftdc2 in Genome Data Viewer
Location:
11q12
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 11 NC_086029.1 (55437980..55441566)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 11 NC_051346.1 (41967947..41973373)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 11 NC_005110.4 (44071086..44079483)

Chromosome 11 - NC_086029.1Genomic Context describing neighboring genes Neighboring gene G protein-coupled receptor 15 Neighboring gene coproporphyrinogen oxidase Neighboring gene ferritin heavy chain-like Neighboring gene ST3 beta-galactoside alpha-2,3-sialyltransferase 6 Neighboring gene uncharacterized LOC108352323

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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Related articles in PubMed

  1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RGD

Process Evidence Code Pubs
involved_in intracellular iron ion homeostasis IEA
Inferred from Electronic Annotation
more info
  
involved_in iron ion transport IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
ferritin heavy chain

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086029.1 Reference GRCr8

    Range
    55437980..55441566
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001057542.7 → XP_001057542.2  ferritin heavy chain

    See identical proteins and their annotated locations for XP_001057542.2

    UniProtKB/TrEMBL
    A6IQL4, D3ZJP9
    Related
    ENSRNOP00000034394.2, ENSRNOT00000033716.3
    Conserved Domains (2) summary
    cd01056
    Location:8 → 153
    Euk_Ferritin; eukaryotic ferritins
    pfam00210
    Location:13 → 143
    Ferritin; Ferritin-like domain
Nucleotide Protein Strain
Heading Accession and Version

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