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Abca14 ATP-binding cassette, sub-family A member 14 [ Mus musculus (house mouse) ]

Gene ID: 67928, updated on 27-Nov-2024

Summary

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Official Symbol
Abca14provided by MGI
Official Full Name
ATP-binding cassette, sub-family A member 14provided by MGI
Primary source
MGI:MGI:2388708
See related
Ensembl:ENSMUSG00000062017 AllianceGenome:MGI:2388708
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
1700110B15Rik; 4930539G24Rik
Summary
Predicted to enable ATPase-coupled transmembrane transporter activity and lipid transporter activity. Predicted to be involved in lipid transport. Predicted to be active in intracellular membrane-bounded organelle. Is expressed in testis. [provided by Alliance of Genome Resources, Nov 2024]
Expression
Restricted expression toward testis adult (RPKM 8.7) See more
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Genomic context

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See Abca14 in Genome Data Viewer
Location:
7 F2; 7 64.5 cM
Exon count:
34
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (119803150..119924577)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (120203927..120325354)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene ankyrin repeat and sterile alpha motif domain containing 4B Neighboring gene crystallin, mu Neighboring gene STARR-seq mESC enhancer starr_20044 Neighboring gene STARR-seq mESC enhancer starr_20045 Neighboring gene STARR-seq mESC enhancer starr_20046 Neighboring gene ATP-binding cassette, sub-family A member 15 Neighboring gene STARR-seq mESC enhancer starr_20047 Neighboring gene ATP-binding cassette, sub-family A member 16 Neighboring gene STARR-seq mESC enhancer starr_20049 Neighboring gene SEC14 and spectrin domains 1 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Three ATP-binding cassette transporter genes, Abca14, Abca15, and Abca16, form a cluster on mouse Chromosome 7F3. Chen ZQ, et al. Mamm Genome, 2004 May. PMID 15170222
  2. High-throughput discovery of novel developmental phenotypes. Dickinson ME, et al. Nature, 2016 Sep 22. PMID 27626380, Free PMC Article
  3. Genetic determinants of micronucleus formation in vivo. Adams DJ, et al. Nature, 2024 Mar. PMID 38355793, Free PMC Article
  4. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  5. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636

See all (12) citations in PubMed

GeneRIFs: Gene References Into Functions

Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (2) 

General gene information

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Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables ATPase-coupled transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables lipid transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in lipid transport IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in intracellular membrane-bounded organelle IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
ATP-binding cassette, sub-family A (ABC1), member 14
Names
ATP-binding cassette transporter sub-family A member 14

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_026458.4 → NP_080734.3  ATP-binding cassette, sub-family A (ABC1), member 14

    See identical proteins and their annotated locations for NP_080734.3

    Status: VALIDATED

    Source sequence(s)
    AC126434, AC151052
    Consensus CDS
    CCDS40108.1
    UniProtKB/TrEMBL
    E9Q8F8, Q6XBG3
    Related
    ENSMUSP00000081690.3, ENSMUST00000084640.3
    Conserved Domains (1) summary
    TIGR01257
    Location:128 → 1673
    rim_protein; retinal-specific rim ABC transporter

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    119803150..119924577
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017312271.2 → XP_017167760.1  ATP-binding cassette, sub-family A (ABC1), member 14 isoform X1

    UniProtKB/TrEMBL
    Q6XBG3
    Conserved Domains (1) summary
    TIGR01257
    Location:128 → 1709
    rim_protein; retinal-specific rim ABC transporter

  2. XM_017312273.2 → XP_017167762.1  ATP-binding cassette, sub-family A (ABC1), member 14 isoform X3

    Conserved Domains (1) summary
    TIGR01257
    Location:128 → 942
    rim_protein; retinal-specific rim ABC transporter

  3. XM_017312274.2 → XP_017167763.1  ATP-binding cassette, sub-family A (ABC1), member 14 isoform X4

    UniProtKB/TrEMBL
    Q8BIR8
    Conserved Domains (1) summary
    TIGR01257
    Location:128 → 896
    rim_protein; retinal-specific rim ABC transporter

  4. XM_006508142.3 → XP_006508205.1  ATP-binding cassette, sub-family A (ABC1), member 14 isoform X2

    See identical proteins and their annotated locations for XP_006508205.1

    UniProtKB/TrEMBL
    E9Q8F8, Q6XBG3
    Conserved Domains (1) summary
    TIGR01257
    Location:128 → 1673
    rim_protein; retinal-specific rim ABC transporter

  5. XM_006508143.3 → XP_006508206.1  ATP-binding cassette, sub-family A (ABC1), member 14 isoform X2

    See identical proteins and their annotated locations for XP_006508206.1

    UniProtKB/TrEMBL
    E9Q8F8, Q6XBG3
    Conserved Domains (1) summary
    TIGR01257
    Location:128 → 1673
    rim_protein; retinal-specific rim ABC transporter

RNA

  1. XR_003946550.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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