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Scgb1b12 secretoglobin, family 1B, member 12 [ Mus musculus (house mouse) ]

Gene ID: 668381, updated on 9-Dec-2024

Summary

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Official Symbol
Scgb1b12provided by MGI
Official Full Name
secretoglobin, family 1B, member 12provided by MGI
Primary source
MGI:MGI:3645736
See related
Ensembl:ENSMUSG00000101520 AllianceGenome:MGI:3645736
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Abpa12; Gm9140; EG668381
Summary
Predicted to enable steroid binding activity. Predicted to be active in extracellular region. [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See Scgb1b12 in Genome Data Viewer
Location:
7 B1; 7 19.34 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (32033607..32034926)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (32334182..32335501)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene secretoglobin, family 2B, member 11 Neighboring gene secretoglobin, family 2B, member 12 Neighboring gene STARR-seq mESC enhancer starr_18561 Neighboring gene glyceraldehyde-3-phosphate dehydrogenase pseudogene Neighboring gene ribosomal protein L23A, pseudogene 11

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Update of the human secretoglobin (SCGB) gene superfamily and an example of 'evolutionary bloom' of androgen-binding protein genes within the mouse Scgb gene superfamily. Jackson BC, et al. Hum Genomics, 2011 Oct. PMID 22155607, Free PMC Article
  2. Rapid bursts of androgen-binding protein (Abp) gene duplication occurred independently in diverse mammals. Laukaitis CM, et al. BMC Evol Biol, 2008 Feb 12. PMID 18269759, Free PMC Article
  3. The lacrimal gland transcriptome is an unusually rich source of rare and poorly characterized gene transcripts. Ozyildirim AM, et al. Invest Ophthalmol Vis Sci, 2005 May. PMID 15851553
  4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
enables steroid binding IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in extracellular region IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
uncharacterized protein LOC668381

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001310633.1 → NP_001297562.1  uncharacterized protein LOC668381 precursor

    See identical proteins and their annotated locations for NP_001297562.1

    Status: VALIDATED

    Source sequence(s)
    CK616815
    Consensus CDS
    CCDS80698.1
    UniProtKB/TrEMBL
    A0A087WP21, A0A7H1MFM1, A0A7S8WJU3, A0A7T3QYU4
    Related
    ENSMUSP00000139594.2, ENSMUST00000188355.2
    Conserved Domains (1) summary
    pfam01099
    Location:1 → 93
    Uteroglobin; Uteroglobin family

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    32033607..32034926
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030242901.1 → XP_030098761.1  uncharacterized protein LOC668381 isoform X1

    UniProtKB/TrEMBL
    A0A7H1MFM1, A0A7T3QYU4
    Conserved Domains (1) summary
    pfam01099
    Location:1 → 101
    Uteroglobin; Uteroglobin family
Nucleotide Protein Strain
Heading Accession and Version

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