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Vmn2r5 vomeronasal 2, receptor 5 [ Mus musculus (house mouse) ]

Gene ID: 667060, updated on 4-Jan-2025

Summary

Official Symbol
Vmn2r5provided by MGI
Official Full Name
vomeronasal 2, receptor 5provided by MGI
Primary source
MGI:MGI:3649074
See related
Ensembl:ENSMUSG00000068999 AllianceGenome:MGI:3649074
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
EG667060
Summary
Predicted to enable G protein-coupled receptor activity and olfactory receptor activity. Predicted to be active in plasma membrane. [provided by Alliance of Genome Resources, Jan 2025]
Expression
Low expression observed in reference dataset See more
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Genomic context

See Vmn2r5 in Genome Data Viewer
Location:
3 E1; 3 30.15 cM
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (64398242..64417156, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (64490783..64509609, complement)

Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene vomeronasal 2, receptor, pseudogene 7 Neighboring gene vomeronasal 2, receptor, pseudogene 8 Neighboring gene vomeronasal 2, receptor 6 Neighboring gene vomeronasal 2, receptor, pseudogene 9

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables G protein-coupled receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables olfactory receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
vomeronasal receptor Vmn2r5

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001385126.1NP_001372055.1  vomeronasal receptor Vmn2r5 precursor

    Status: VALIDATED

    Source sequence(s)
    AC113321
    Consensus CDS
    CCDS50922.1
    UniProtKB/TrEMBL
    K7N788, L7N1Z7
    Related
    ENSMUSP00000135592.2, ENSMUST00000177184.9
    Conserved Domains (3) summary
    cd15280
    Location:618870
    7tmC_V2R-like; vomeronasal type-2 receptor-like proteins, member of the class C family of seven-transmembrane G protein-coupled receptors
    cd06364
    Location:49537
    PBP1_CaSR; ligand-binding domain of the CaSR calcium-sensing receptor, a member of the family C receptors within the G-protein coupled receptor superfamily
    pfam07562
    Location:545598
    NCD3G; Nine Cysteines Domain of family 3 GPCR

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000069.7 Reference GRCm39 C57BL/6J

    Range
    64398242..64417156 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001104618.1: Suppressed sequence

    Description
    NM_001104618.1: This RefSeq was removed because currently there is insufficient support for the transcript and the protein.