NEW
Try the new Transcript table
These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_050929.1 RefSeqGene
- Range
-
5031..40010
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001024845.3 → NP_001020016.1 sodium- and chloride-dependent glycine transporter 1 isoform 3
See identical proteins and their annotated locations for NP_001020016.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR and coding region compared to variant 2. The resulting isoform (3) is shorter and has a distinct N-terminus compared to isoform 2. Variants 3 and 9 both encode the same isoform (3).
- Source sequence(s)
-
AI884725, AL139220, CN354684, S70609
- Consensus CDS
-
CCDS30695.1
- UniProtKB/Swiss-Prot
-
P48067
- Related
- ENSP00000361384.4, ENST00000372310.8
- Conserved Domains (1) summary
-
- cd11498
Location:11 → 594
- SLC6sbd_GlyT1; Na(+)- and Cl(-)-dependent glycine transporter GlyT1; solute-binding domain
-
NM_001261380.2 → NP_001248309.1 sodium- and chloride-dependent glycine transporter 1 isoform 4
See identical proteins and their annotated locations for NP_001248309.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) lacks an alternate in-frame exon and uses an alternate in-frame splice site in the 5' coding region compared to variant 2. The resulting protein (isoform 4) is shorter compared to isoform 2.
- Source sequence(s)
-
AK296438, AL139220, DA403430
- UniProtKB/TrEMBL
-
B7Z3W8
- Conserved Domains (1) summary
-
- cd11498
Location:30 → 598
- SLC6sbd_GlyT1; Na(+)- and Cl(-)-dependent glycine transporter GlyT1; solute-binding domain
-
NM_001328626.2 → NP_001315555.1 sodium- and chloride-dependent glycine transporter 1 isoform 5
Status: REVIEWED
- Description
- Transcript Variant: This variant (6) differs in the 5' UTR and coding sequence compared to variant 2. The resulting isoform (5) is shorter at the N-terminus compared to isoform 2.
- Source sequence(s)
-
AL139220
- Consensus CDS
-
CCDS85966.1
- UniProtKB/TrEMBL
-
B7Z589
- Related
- ENSP00000434460.1, ENST00000475075.6
- Conserved Domains (1) summary
-
- cl00456
Location:1 → 483
- SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
-
NM_001328627.1 → NP_001315556.1 sodium- and chloride-dependent glycine transporter 1 isoform 6
Status: REVIEWED
- Description
- Transcript Variant: This variant (7) lacks an alternate exon in the 5' end compared to variant 2. The resulting isoform (6) has a shorter and distinct N-terminus compared to isoform 2.
- Source sequence(s)
-
AL139220
- Conserved Domains (1) summary
-
- cl00456
Location:42 → 573
- SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
-
NM_001328628.1 → NP_001315557.1 sodium- and chloride-dependent glycine transporter 1 isoform 7
Status: REVIEWED
- Description
- Transcript Variant: This variant (8) lacks two alternate exons in the 5' end compared to variant 2. The resulting isoform (7) has a shorter and distinct N-terminus compared to isoform 2.
- Source sequence(s)
-
AL139220
- Conserved Domains (1) summary
-
- cl00456
Location:30 → 529
- SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
-
NM_001328629.1 → NP_001315558.1 sodium- and chloride-dependent glycine transporter 1 isoform 3
Status: REVIEWED
- Description
- Transcript Variant: This variant (9) differs in the 5' UTR and coding sequence compared to variant 2. The resulting isoform (3) has a shorter and distinct N-terminus compared to isoform 2. Variants 3 and 9 both encode the same isoform (3).
- Source sequence(s)
-
AL139220
- Consensus CDS
-
CCDS30695.1
- UniProtKB/Swiss-Prot
-
P48067
- Related
- ENSP00000501314.1, ENST00000673836.1
- Conserved Domains (1) summary
-
- cd11498
Location:11 → 594
- SLC6sbd_GlyT1; Na(+)- and Cl(-)-dependent glycine transporter GlyT1; solute-binding domain
-
NM_001328630.2 → NP_001315559.1 sodium- and chloride-dependent glycine transporter 1 isoform 8
Status: REVIEWED
- Description
- Transcript Variant: This variant (10) differs in the 5' UTR and coding sequence and lacks an alternate 3' in-frame exon compared to variant 2. The resulting isoform (8) is shorter at the N-terminus and lacks an alternate C-terminal segment compared to isoform 2.
- Source sequence(s)
-
AL139220
-
NM_006934.4 → NP_008865.2 sodium- and chloride-dependent glycine transporter 1 isoform 1
See identical proteins and their annotated locations for NP_008865.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) lacks an alternate in-frame exon compared to variant 2. The resulting isoform (1) has the same N- and C-termini but is shorter compared to isoform 2.
- Source sequence(s)
-
AI884725, AL139220, S70612
- Consensus CDS
-
CCDS41316.1
- UniProtKB/Swiss-Prot
-
P48067
- Related
- ENSP00000350362.2, ENST00000357730.6
- Conserved Domains (1) summary
-
- cd11498
Location:30 → 613
- SLC6sbd_GlyT1; Na(+)- and Cl(-)-dependent glycine transporter GlyT1; solute-binding domain
-
NM_201649.4 → NP_964012.2 sodium- and chloride-dependent glycine transporter 1 isoform 2
See identical proteins and their annotated locations for NP_964012.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) represents the longest transcript and encodes the longest isoform (2).
- Source sequence(s)
-
AI884725, AL139220, S70609
- Consensus CDS
-
CCDS41317.1
- UniProtKB/Swiss-Prot
- A6NDH1, A6NII2, A6NNZ8, P48067, Q5TAB8, Q5TAB9, Q5TAC0
- Related
- ENSP00000353791.2, ENST00000360584.6
- Conserved Domains (1) summary
-
- cd11498
Location:84 → 667
- SLC6sbd_GlyT1; Na(+)- and Cl(-)-dependent glycine transporter GlyT1; solute-binding domain
RNA
-
NR_048548.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) lacks an alternate 5' exon compared to variant 2. This variant is represented as non-coding because the use of the 5'-most supported translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AK315233, AL139220