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Bche butyrylcholinesterase [ Rattus norvegicus (Norway rat) ]

Gene ID: 65036, updated on 27-Nov-2024

Summary

Official Symbol
Bcheprovided by RGD
Official Full Name
butyrylcholinesteraseprovided by RGD
Primary source
RGD:619996
See related
EnsemblRapid:ENSRNOG00000009826 AllianceGenome:RGD:619996
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Enables choline binding activity and cholinesterase activity. Involved in several processes, including neuroblast differentiation; response to folic acid; and response to glucocorticoid. Located in endoplasmic reticulum lumen and extracellular space. Used to study amnestic disorder and hyperhomocysteinemia. Biomarker of leptospirosis and trypanosomiasis. Human ortholog(s) of this gene implicated in Alzheimer's disease; coronary artery disease (multiple); epilepsy; and inherited metabolic disorder (multiple). Orthologous to human BCHE (butyrylcholinesterase). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in Heart (RPKM 176.5), Liver (RPKM 64.0) and 8 other tissues See more
Orthologs
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Genomic context

See Bche in Genome Data Viewer
Location:
2q32
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 2 NC_086020.1 (160607289..160699760, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 2 NC_051337.1 (158308674..158401148, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 2 NC_005101.4 (171104476..171196186, complement)

Chromosome 2 - NC_086020.1Genomic Context describing neighboring genes Neighboring gene U7 small nuclear RNA Neighboring gene U2 spliceosomal RNA Neighboring gene U2 spliceosomal RNA Neighboring gene U2 spliceosomal RNA

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables acetylcholinesterase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables acetylcholinesterase activity ISO
Inferred from Sequence Orthology
more info
 
enables choline binding IDA
Inferred from Direct Assay
more info
PubMed 
enables cholinesterase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables cholinesterase activity ISO
Inferred from Sequence Orthology
more info
 
enables identical protein binding ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
located_in endoplasmic reticulum ISO
Inferred from Sequence Orthology
more info
 
located_in endoplasmic reticulum lumen IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in extracellular space IDA
Inferred from Direct Assay
more info
PubMed 
located_in nuclear envelope lumen ISO
Inferred from Sequence Orthology
more info
 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_022942.1NP_075231.1  cholinesterase precursor

    See identical proteins and their annotated locations for NP_075231.1

    Status: PROVISIONAL

    Source sequence(s)
    AF244349
    UniProtKB/TrEMBL
    A0A8J8XQI9, F1LQK0, Q9JKC1
    Related
    ENSRNOP00000013279.3, ENSRNOT00000013279.5
    Conserved Domains (3) summary
    COG0657
    Location:120272
    Aes; Acetyl esterase/lipase [Lipid transport and metabolism]
    pfam00135
    Location:21545
    COesterase; Carboxylesterase family
    pfam08674
    Location:560594
    AChE_tetra; Acetylcholinesterase tetramerization domain

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086020.1 Reference GRCr8

    Range
    160607289..160699760 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)