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dapF Diaminopimelate epimerase [ Paulinella chromatophora ]

Gene ID: 6482052, updated on 16-Jul-2016

Summary

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Gene symbol
dapF
Gene description
Diaminopimelate epimerase
Locus tag
PCC_0153
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Paulinella chromatophora
Lineage
Eukaryota; Rhizaria; Cercozoa; Silicofilosea; Euglyphida; Paulinellidae; Paulinella
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Genomic context

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Sequence:
NC_011087.1 (171317..172447, complement)

NC_011087.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene possible cysteine desulfurase (class-V aminotransferase family protein) Neighboring gene t-RNA synthetase, class Ia:Leucyl-tRNA synthetase Neighboring gene glucose-6-phosphate isomerase Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_011087.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Chromatophore genome sequence of Paulinella sheds light on acquisition of photosynthesis by eukaryotes. Nowack EC, et al. Curr Biol, 2008 Mar 25. PMID 18356055

GeneRIFs: Gene References Into Functions

General protein information

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Names
Diaminopimelate epimerase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_011087.1 Reference assembly

    Range
    171317..172447 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_002048814.1 Diaminopimelate epimerase [Paulinella chromatophora]

    See identical proteins and their annotated locations for YP_002048814.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B1X3T5
    Conserved Domains (2) summary
    PRK00450
    Location:1 → 285
    dapF; diaminopimelate epimerase; Provisional
    pfam01678
    Location:4 → 129
    DAP_epimerase; Diaminopimelate epimerase
Nucleotide Protein
Heading Accession and Version