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LINC02604 long intergenic non-protein coding RNA 2604 [ Homo sapiens (human) ]

Gene ID: 644794, updated on 17-Sep-2024

Summary

Official Symbol
LINC02604provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 2604provided by HGNC
Primary source
HGNC:HGNC:53972
See related
AllianceGenome:HGNC:53972
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
lncHERG
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Genomic context

See LINC02604 in Genome Data Viewer
Location:
7q11.21
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (66904120..66906297)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (68123794..68125971)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (66369107..66371284)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene H3K27ac hESC enhancer GRCh37_chr7:66313905-66314406 Neighboring gene H3K27ac hESC enhancer GRCh37_chr7:66314407-66314906 Neighboring gene general transcription factor IIi pseudogene 23 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26090 Neighboring gene RNA, U6 small nuclear 1254, pseudogene Neighboring gene ribosomal protein L31 pseudogene 38 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18218 Neighboring gene transmembrane protein 248 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr7:66415389-66416588 Neighboring gene Sharpr-MPRA regulatory region 14266

Genomic regions, transcripts, and products

General gene information

Other Names

  • highly expressed long noncoding RNA in glioblastoma

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_136637.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK301184, BX095909, CD367746

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

    Range
    66904120..66906297
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060931.1 Alternate T2T-CHM13v2.0

    Range
    68123794..68125971
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)