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FAM25EP family with sequence similarity 25 member E, pseudogene [ Homo sapiens (human) ]

Gene ID: 643479, updated on 10-Dec-2024

Summary

Official Symbol
FAM25EPprovided by HGNC
Official Full Name
family with sequence similarity 25 member E, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:23587
See related
Ensembl:ENSG00000290779 AllianceGenome:HGNC:23587
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
FAM25D; FAM25E
Expression
Low expression observed in reference dataset See more
Orthologs
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Genomic context

See FAM25EP in Genome Data Viewer
Location:
10q11.22
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (45815428..45817324, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (46696493..46698398, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (46310876..46312772, complement)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 21 member F, pseudogene Neighboring gene RNA guanine-N7 methyltransferase activating subunit-like Neighboring gene H3K27ac hESC enhancer GRCh37_chr10:46221940-46222685 Neighboring gene H3K27ac hESC enhancer GRCh37_chr10:46222686-46223430 Neighboring gene Sharpr-MPRA regulatory region 4830 Neighboring gene WASH complex subunit 2C Neighboring gene PARGP1-AGAP4 readthrough Neighboring gene ArfGAP with GTPase domain, ankyrin repeat and PH domain 4 Neighboring gene RNA, 5S ribosomal pseudogene 310 Neighboring gene PARG pseudogene 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Other Names

  • family with sequence similarity 25 member D
  • family with sequence similarity 25 member E
  • protein FAM25D/E
  • protein FAM25E

Clone Names

  • AC012044.5

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_172103.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC012044
    Related
    ENST00000411791.5

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

    Range
    45815428..45817324 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060934.1 Alternate T2T-CHM13v2.0

    Range
    46696493..46698398 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001351234.1: Suppressed sequence

    Description
    NM_001351234.1: This RefSeq was removed because it is now thought that this gene is a pseudogene.