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RPL36AP31 ribosomal protein L36a pseudogene 31 [ Homo sapiens (human) ]

Gene ID: 642320, updated on 17-Sep-2024

Summary

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Official Symbol
RPL36AP31provided by HGNC
Official Full Name
ribosomal protein L36a pseudogene 31provided by HGNC
Primary source
HGNC:HGNC:36066
See related
AllianceGenome:HGNC:36066
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPL36A_13_923
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Genomic context

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See RPL36AP31 in Genome Data Viewer
Location:
8q21.3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (86016786..86017178)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (87134215..87134607)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (87029015..87029407)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124901971 Neighboring gene Sharpr-MPRA regulatory region 4822 Neighboring gene ReSE screen-validated silencer GRCh37_chr8:86914685-86914911 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:86933576-86934202 Neighboring gene GATA motif-containing MPRA enhancer 208 Neighboring gene MPRA-validated peak7094 silencer Neighboring gene uncharacterized LOC107986954 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr8:87014581-87015780 Neighboring gene ribosomal protein L32 pseudogene 4 Neighboring gene NANOG hESC enhancer GRCh37_chr8:87076390-87076891 Neighboring gene protein serine kinase H2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. Balasubramanian S, et al. Genome Biol, 2009. PMID 19123937, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_010062.2 

    Range
    101..493
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    86016786..86017178
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060932.1 Alternate T2T-CHM13v2.0

    Range
    87134215..87134607
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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