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F54F7.10 Elongin-C [ Caenorhabditis elegans ]

Gene ID: 6418855, updated on 9-Dec-2024

Summary

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Official Symbol
F54F7.10
Official Full Name
Elongin-C
Primary source
WormBase:WBGene00077680
Locus tag
CELE_F54F7.10
See related
AllianceGenome:WB:WBGene00077680
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable protein-macromolecule adaptor activity. Predicted to be involved in ubiquitin-dependent protein catabolic process. Predicted to be part of elongin complex. Orthologous to human ELOC (elongin C). [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See F54F7.10 in Genome Data Viewer
Location:
chromosome: X
Exon count:
2
Sequence:
Chromosome: X; NC_003284.9 (11863607..11864879)

Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene MX region of TRA-2 Related Neighboring gene Ovule protein Neighboring gene Protein mes-1 Neighboring gene Conserved plasma membrane protein Neighboring gene Histone-lysine N-methyltransferase, H3 lysine-79 specific

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003284.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables protein-macromolecule adaptor activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in ubiquitin-dependent protein catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of elongin complex IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
Elongin-C
NP_001123148.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003284.9 Reference assembly

    Range
    11863607..11864879
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001129676.2 → NP_001123148.1  Elongin-C [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001123148.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    B1Q256
    Conserved Domains (1) summary
    cd18321
    Location:46 → 138
    BTB_POZ_EloC; BTB (Broad-Complex, Tramtrack and Bric a brac) /POZ (poxvirus and zinc finger) domain found in Elongin-C (EloC) and similar proteins
Nucleotide Protein
Heading Accession and Version

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