Vmn2r58 vomeronasal 2, receptor 58 [Mus musculus (house mouse)] - Gene

Summary

Official Symbol: Vmn2r58provided by MGI
Official Full Name: vomeronasal 2, receptor 58provided by MGI
Primary source: MGI:MGI:3647877
See related: Ensembl:ENSMUSG00000090383 AllianceGenome:MGI:3647877
Gene type: protein coding
RefSeq status: INFERRED
Organism: Mus musculus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as: EG628422
Summary: Predicted to enable G protein-coupled receptor activity. Predicted to be active in plasma membrane. [provided by Alliance of Genome Resources, Dec 2024]
Expression: Low expression observed in reference dataset See more
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Genomic context

Location:: 7 B3; 7 28.25 cM

Exon count:: 6

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCm39 (GCF_000001635.27)	7	NC_000073.7 (41486305..41522094, complement)
108.20200622	previous assembly	GRCm38.p6 (GCF_000001635.26)	7	NC_000073.6 (41836881..41872670, complement)

Chromosome 7 - NC_000073.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Mouse ENCODE transcriptome data
Description: RNA profiling data sets generated by the Mouse ENCODE project.
BioProject: PRJNA66167
Publication: PMID 25409824
Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

Gprc2a-rs4 (e-PCR), detects polymorphism
- UniSTS:256976

Gene Ontology Provided by MGI

Function	Evidence Code	Pubs
enables G protein-coupled receptor activity	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
is_active_in plasma membrane	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: vomeronasal receptor Vmn2r58

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001105055.1 → NP_001098525.1 vomeronasal receptor Vmn2r58 precursor

Status: INFERRED

Source sequence(s)

AC108824

Consensus CDS

CCDS52212.1

UniProtKB/TrEMBL

K7N6V2

Related

ENSMUSP00000126966.2, ENSMUST00000171671.3

Conserved Domains (4) summary

cd06365
Location:36 → 506

PBP1_Pheromone_receptor; Ligand-binding domain of the V2R phermone receptor, a member of the family C receptors within the G-protein coupled receptor superfamily

pfam00003
Location:601 → 835

7tm_3; 7 transmembrane sweet-taste receptor of 3 GCPR

pfam01094
Location:80 → 470

ANF_receptor; Receptor family ligand binding region

pfam07562
Location:515 → 566

NCD3G; Nine Cysteines Domain of family 3 GPCR