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Ribosomal protein L31 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 6241018, updated on 18-Sep-2024

Summary

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Official Full Name
Ribosomal protein L31
Primary source
TAIR:AT5G55125
Locus tag
AT5G55125
See related
Araport:AT5G55125
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 5
Exon count:
2
Sequence:
Chromosome: 5; NC_003076.8 (22371991..22373209)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Stigma-specific Stig1 family protein Neighboring gene GDP-L-galactose phosphorylase VITAMIN C DEFECTIVE 5 (VTC5) Neighboring gene co-factor for nitrate, reductase and xanthine dehydrogenase 5 Neighboring gene Protein of unknown function (PD694200) Neighboring gene Defensin-like (DEFL) family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
  2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_001125968.2
NM_001125969.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in plastid HDA PubMed 

General protein information

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Preferred Names
Ribosomal protein L31
NP_001119440.1
  • Ribosomal protein L31; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; CONTAINS InterPro DOMAIN/s: Ribosomal protein L31 (InterPro:IPR002150); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
NP_001119441.1
  • Ribosomal protein L31; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; CONTAINS InterPro DOMAIN/s: Ribosomal protein L31 (InterPro:IPR002150); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    22371991..22373209
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001125968.2 → NP_001119440.1  Ribosomal protein L31 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001119440.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UB48, A0MDV0, Q1G3G5
    Conserved Domains (1) summary
    cl00377
    Location:1 → 58
    Ribosomal_L31; Ribosomal protein L31

  2. NM_001125969.1 → NP_001119441.1  Ribosomal protein L31 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001119441.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UB48, A0MDV0, Q1G3G5
    Conserved Domains (1) summary
    cl00377
    Location:1 → 58
    Ribosomal_L31; Ribosomal protein L31
Nucleotide Protein
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