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CPuORF36 conserved peptide upstream open reading frame 36 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 6240658, discontinued on 14-Sep-2016
  • This record was discontinued.

Summary

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Gene symbol
CPuORF36
Gene description
conserved peptide upstream open reading frame 36
Locus tag
AT5G50012
See related
TAIR:AT5G50012
Gene type
protein coding
RNA name
conserved peptide upstream open reading frame 36
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
conserved peptide upstream open reading frame 36; CPuORF36
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Genomic context

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Location:
chromosome: 5
Exon count:
1
Sequence:
Chromosome: 5; NC_003076.8 (20348896..20348967)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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  • Upstream open reading frames (uORFs) are small open reading frames found in the 5' UTR of a mature mRNA, and can potentially mediate translational regulation of the largest, or major, ORF (mORF). CPuORF36 represents a conserved upstream opening reading frame relative to major ORF AT5G50010.1

General protein information

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Names
conserved peptide upstream open reading frame 36
NP_001119404.1
  • conserved peptide upstream open reading frame 36 (CPuORF36); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    20348896..20348967
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001125932.2 → NP_001119404.1  conserved peptide upstream open reading frame 36 [Arabidopsis thaliana]

    Status: REVIEWED

Protein Accession Links
GenPept Link UniProtKB Link
AED95885.1

Gene LinkOut

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