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G4D54_RS22930 helix-turn-helix transcriptional regulator [ [Clostridium] innocuum ]

Gene ID: 61928457, updated on 10-Oct-2024

Summary

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Gene symbol
G4D54_RS22930
Gene description
helix-turn-helix transcriptional regulator
Locus tag
G4D54_RS22930
Gene type
protein coding
Organism
[Clostridium] innocuum (strain: ATCC 14501, culture-collection: ATCC:14501, type-material: type strain of Clostridium innocuum)
Lineage
Bacteria; Bacillota; Erysipelotrichia; Erysipelotrichales; Coprobacillaceae; Thomasclavelia
Old locus tag
G4D54_22930
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Genomic context

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NZ_CP048838.1Genomic Context describing neighboring genes Neighboring gene RNA-binding S4 domain-containing protein Neighboring gene AbrB/MazE/SpoVT family DNA-binding domain-containing protein Neighboring gene methionine adenosyltransferase Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP048838.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. High-Quality Whole-Genome Sequences of the Oligo-Mouse-Microbiota Bacterial Community. Garzetti D, et al. Genome Announc, 2017 Oct 19. PMID 29051233, Free PMC Article
  2. Molecular evolution of helix-turn-helix proteins. Rosinski JA, et al. J Mol Evol, 1999 Sep. PMID 10473770

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
helix-turn-helix transcriptional regulator

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP048838.1 Reference assembly

    Range
    4685227..4685469
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_002606647.1 MULTISPECIES: helix-turn-helix transcriptional regulator [Thomasclavelia]

    See identical proteins and their annotated locations for WP_002606647.1

    UniProtKB/TrEMBL
    A0A099IA23, A0A1C7HM90, A0A3A6DEI4, A0AAN3R8F1, E2SQX7, G1VPP2, H1B4I2, N9VDL5
    Conserved Domains (1) summary
    cd00093
    Location:9 → 66
    HTH_XRE; Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.
Nucleotide Protein
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