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LSM10 LSM10, U7 small nuclear RNA associated [ Bos taurus (domestic cattle) ]

Gene ID: 618089, updated on 30-Jan-2025

Summary

Official Symbol
LSM10provided by VGNC
Official Full Name
LSM10, U7 small nuclear RNA associatedprovided by VGNC
Primary source
VGNC:VGNC:31051
See related
BGD:BT25825; EnsemblRapid:ENSBTAG00070003412
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
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Genomic context

See LSM10 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 3 NC_037330.1 (109482126..109484588)

Chromosome 3 - NC_037330.1Genomic Context describing neighboring genes Neighboring gene mitochondrial ribosomal protein S15 Neighboring gene organic solute carrier partner 1 Neighboring gene uncharacterized LOC104971845 Neighboring gene serine/threonine kinase 40

Genomic regions, transcripts, and products

Genomic Sequence:
NC_037330.1 Chromosome 3 Reference ARS-UCD2.0 Primary Assembly

Expression

  • Project title: Dominette sequence data
  • BioProject: PRJNA294306
  • Analysis date: Tue Dec 17 08:57:05 2024

General gene information

Clone Names

  • MGC155164

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables U7 snRNA binding IEA
Inferred from Electronic Annotation
more info
PubMed 
enables histone pre-mRNA DCP binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in mRNA 3'-end processing by stem-loop binding and cleavage IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
part_of cytoplasmic U snRNP body IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in nuclear body IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
U7 snRNA-associated Sm-like protein LSm10

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001083781.1NP_001077250.1  U7 snRNA-associated Sm-like protein LSm10

    See identical proteins and their annotated locations for NP_001077250.1

    Status: PROVISIONAL

    Source sequence(s)
    BC134669
    UniProtKB/TrEMBL
    A4IFN1
    Related
    ENSBTAP00070004466.1, ENSBTAT00070007756.1
    Conserved Domains (1) summary
    cd01733
    Location:885
    LSm10; Like-Sm protein 10

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037330.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    109482126..109484588
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)