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recF DNA replication/repair protein RecF [ Ectopseudomonas oleovorans CECT 5344 ]

Gene ID: 61797815, updated on 22-Oct-2024

Summary

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Gene symbol
recF
Gene description
DNA replication/repair protein RecF
Locus tag
BN5_RS00015
Gene type
protein coding
Organism
Ectopseudomonas oleovorans CECT 5344 (strain: CECT5344)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Ectopseudomonas
Old locus tag
BN5_0003
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Genomic context

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Location:
chromosome: I

I - NZ_HG916826.1Genomic Context describing neighboring genes Neighboring gene chromosomal replication initiator protein DnaA Neighboring gene DNA polymerase III subunit beta Neighboring gene DNA topoisomerase (ATP-hydrolyzing) subunit B Neighboring gene pseudo

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_HG916826.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Mechanism of RecF-RecO-RecR cooperation in bacterial homologous recombination. Nirwal S, et al. Nat Struct Mol Biol, 2023 May. PMID 37081315
  2. Visualization of DNA double-strand break repair in live bacteria reveals dynamic recruitment of Bacillus subtilis RecF, RecO and RecN proteins to distinct sites on the nucleoids. Kidane D, et al. Mol Microbiol, 2004 Jun. PMID 15186413
  3. RecF protein targeting to post-replication (daughter strand) gaps II: RecF interaction with replisomes. Henry C, et al. Nucleic Acids Res, 2023 Jun 23. PMID 37125644, Free PMC Article
  4. Single-strand gap repair involves both RecF and RecBCD pathways. Pagès V. Curr Genet, 2016 Aug. PMID 26874520
  5. Reconstitution of initial steps of dsDNA break repair by the RecF pathway of E. coli. Handa N, et al. Genes Dev, 2009 May 15. PMID 19451222, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
DNA replication/repair protein RecF
WP_003458434.1
  • All proteins in this family for which functions are known are DNA-binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair.

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_HG916826.1 Reference assembly

    Range
    3016..4119
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_003458434.1 DNA replication/repair protein RecF [Pseudomonas oleovorans]

    See identical proteins and their annotated locations for WP_003458434.1

    UniProtKB/TrEMBL
    W6R9S3
    Conserved Domains (2) summary
    PRK00064
    Location:1 → 361
    recF; recombination protein F; Reviewed
    cl21455
    Location:3 → 360
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein
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