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RGS1 regulator of G protein signaling 1 [ Homo sapiens (human) ]

Gene ID: 5996, updated on 27-Nov-2024

Summary

Official Symbol
RGS1provided by HGNC
Official Full Name
regulator of G protein signaling 1provided by HGNC
Primary source
HGNC:HGNC:9991
See related
Ensembl:ENSG00000090104 MIM:600323; AllianceGenome:HGNC:9991
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
1R20; BL34; IER1; IR20; HEL-S-87
Summary
This gene encodes a member of the regulator of G-protein signalling family. This protein is located on the cytosolic side of the plasma membrane and contains a conserved, 120 amino acid motif called the RGS domain. The protein attenuates the signalling activity of G-proteins by binding to activated, GTP-bound G alpha subunits and acting as a GTPase activating protein (GAP), increasing the rate of conversion of the GTP to GDP. This hydrolysis allows the G alpha subunits to bind G beta/gamma subunit heterodimers, forming inactive G-protein heterotrimers, thereby terminating the signal. [provided by RefSeq, Jul 2008]
Expression
Broad expression in appendix (RPKM 110.9), lymph node (RPKM 72.3) and 17 other tissues See more
Orthologs
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Genomic context

See RGS1 in Genome Data Viewer
Location:
1q31.2
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (192575773..192580024)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (191922968..191927219)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (192544903..192549154)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124904473 Neighboring gene regulator of G protein signaling 21 Neighboring gene uncharacterized LOC124904472 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:192469395-192469976 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:192469977-192470558 Neighboring gene uncharacterized LOC105371664 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2257 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2258 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1651 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2259 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2260 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2261 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2262 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2263 Neighboring gene uncharacterized LOC107985241 Neighboring gene regulator of G protein signaling 13

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Phenotypes

EBI GWAS Catalog

Description
Genetic risk and a primary role for cell-mediated immune mechanisms in multiple sclerosis.
EBI GWAS Catalog
Multiple common variants for celiac disease influencing immune gene expression.
EBI GWAS Catalog
Newly identified genetic risk variants for celiac disease related to the immune response.
EBI GWAS Catalog

HIV-1 interactions

Protein interactions

Protein Gene Interaction Pubs
Envelope surface glycoprotein gp120 env HIV-1 gp120 upregulates the expression of regulator of G-protein signaling 1 (RGS1) in human B cells PubMed
Tat tat HIV-1 Tat upregulates the expression of regulator of G-protein signaling 1 (RGS1) in human primary T cells PubMed

Go to the HIV-1, Human Interaction Database

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables G-protein alpha-subunit binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables GTPase activator activity IDA
Inferred from Direct Assay
more info
PubMed 
enables GTPase activity TAS
Traceable Author Statement
more info
 
enables calmodulin binding TAS
Traceable Author Statement
more info
PubMed 
Component Evidence Code Pubs
located_in cytoplasmic side of plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in cytosol IDA
Inferred from Direct Assay
more info
PubMed 
located_in plasma membrane TAS
Traceable Author Statement
more info
 

General protein information

Preferred Names
regulator of G-protein signaling 1
Names
B-cell activation protein BL34
early response protein 1R20
epididymis secretory protein Li 87
immediate-early response 1, B-cell specific
regulator of G-protein signalling 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_002922.4NP_002913.3  regulator of G-protein signaling 1

    See identical proteins and their annotated locations for NP_002913.3

    Status: REVIEWED

    Source sequence(s)
    AL136987, BC015510, BG536972
    Consensus CDS
    CCDS1375.2
    UniProtKB/Swiss-Prot
    B2RDM9, B4DZY0, Q07918, Q08116, Q9H1W2
    UniProtKB/TrEMBL
    V9HW15
    Related
    ENSP00000356429.3, ENST00000367459.8
    Conserved Domains (1) summary
    cd08715
    Location:86199
    RGS_RGS1; Regulator of G protein signaling (RGS) domain found in the RGS1 protein

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    192575773..192580024
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    191922968..191927219
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)