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znf1156 zinc finger protein 1156 [ Danio rerio (zebrafish) ]

Gene ID: 571761, updated on 4-Jan-2025

Summary

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Official Symbol
znf1156provided by ZNC
Official Full Name
zinc finger protein 1156provided by ZNC
Primary source
ZFIN:ZDB-GENE-050208-787
See related
Ensembl:ENSDARG00000098800 AllianceGenome:ZFIN:ZDB-GENE-050208-787
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
si:dkey-15h8.11
Summary
Predicted to enable metal ion binding activity. Predicted to be located in nucleus. [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See znf1156 in Genome Data Viewer
Location:
chromosome: 22
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 22 NC_007133.7 (1911267..1919599)
105 previous assembly GRCz10 (GCF_000002035.5) 22 NC_007133.6 (1894400..1902701)

Chromosome 22 - NC_007133.7Genomic Context describing neighboring genes Neighboring gene si:dkey-15h8.17 Neighboring gene zinc finger protein 135 Neighboring gene si:dkey-15h8.13 Neighboring gene zinc finger protein 1167

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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Related articles in PubMed

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
zinc finger protein 1156

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001104945.1 → NP_001098415.1  zinc finger protein 1156

    See identical proteins and their annotated locations for NP_001098415.1

    Status: PROVISIONAL

    Source sequence(s)
    BC152084
    UniProtKB/TrEMBL
    A0A0N4STV1, A7MC87, A7MCA3
    Related
    ENSDARP00000132593.1, ENSDART00000168205.2
    Conserved Domains (4) summary
    COG5048
    Location:36 → 197
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:11 → 31
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:23 → 48
    zf-H2C2_2; Zinc-finger double domain
    pfam16278
    Location:90 → 115
    zf-C2HE; C2HE / C2H2 / C2HC zinc-binding finger

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007133.7 Reference GRCz11 Primary Assembly

    Range
    1911267..1919599
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009295789.3 → XP_009294064.3  zinc finger protein 1156 isoform X1

    Related
    ENSDARP00000130843.1, ENSDART00000164158.2
Nucleotide Protein
Heading Accession and Version

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