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uncharacterized protein [ Chlamydomonas reinhardtii ]

Gene ID: 5716413, updated on 18-Sep-2024

Summary

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Official Full Name
uncharacterized protein
Primary source
Phytozome:Cre12.g502600
Locus tag
CHLRE_12g502600v5
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Chlamydomonas reinhardtii (strain: CC-503 cw92 mt+)
Lineage
Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Chlorophyceae; CS clade; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas
Old locus tag
CHLREDRAFT_205502
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Genomic context

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Location:
chromosome: 12
Exon count:
12
Sequence:
Chromosome: 12; NC_057015.1 (2807687..2813938)

Chromosome 12 - NC_057015.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_057015.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Chlamydomonas genome reveals the evolution of key animal and plant functions. Merchant SS, et al. Science, 2007 Oct 12. PMID 17932292, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables monoatomic cation transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in potassium ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_057015.1 Reference assembly

    Range
    2807687..2813938
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001690923.2 → XP_001690975.1  uncharacterized protein CHLRE_12g502600v5 [Chlamydomonas reinhardtii]

    See identical proteins and their annotated locations for XP_001690975.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    A8IJF8
    UniProtKB/TrEMBL
    A0A2K3D361
    Conserved Domains (3) summary
    pfam02080
    Location:512 → 571
    TrkA_C; TrkA-C domain
    pfam03600
    Location:30 → 213
    CitMHS; Citrate transporter
    cl21473
    Location:601 → 789
    ArsB_NhaD_permease; Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices ...
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A8IJF8.1

Gene LinkOut

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Molecular Biology Databases
Research Materials