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them6 thioesterase superfamily member 6 [ Danio rerio (zebrafish) ]

Gene ID: 569944, updated on 9-Dec-2024

Summary

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Official Symbol
them6provided by ZNC
Official Full Name
thioesterase superfamily member 6provided by ZNC
Primary source
ZFIN:ZDB-GENE-070912-340
See related
Ensembl:ENSDARG00000100260 AllianceGenome:ZFIN:ZDB-GENE-070912-340
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
wu:fb81b06; si:ch73-52e5.1
Summary
Predicted to be located in membrane. Orthologous to human THEM6 (thioesterase superfamily member 6). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
all
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Genomic context

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See them6 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 2 NC_007113.7 (51098638..51109476, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 2 NC_007113.6 (51364418..51375256, complement)

Chromosome 2 - NC_007113.7Genomic Context describing neighboring genes Neighboring gene finTRIM family, member 67 Neighboring gene si:ch73-52e5.2 Neighboring gene leucine rich repeat containing 24 Neighboring gene polymeric immunoglobulin receptor-like 4.2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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Related articles in PubMed

  1. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by ZFIN

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Protein THEM6-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001122704.1 → NP_001116176.1  Protein THEM6-like

    Status: PROVISIONAL

    Source sequence(s)
    CT027572
    UniProtKB/TrEMBL
    A0A0R4IMG3, A0A8M1NI46
    Related
    ENSDARP00000135990.1, ENSDART00000168286.2
    Conserved Domains (1) summary
    pfam13279
    Location:53 → 183
    4HBT_2; Thioesterase-like superfamily

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007113.7 Reference GRCz11 Primary Assembly

    Range
    51098638..51109476 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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