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si:ch211-161h7.5 si:ch211-161h7.5 [ Danio rerio (zebrafish) ]

Gene ID: 569866, updated on 4-Jan-2025

Summary

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Official Symbol
si:ch211-161h7.5provided by ZNC
Official Full Name
si:ch211-161h7.5provided by ZNC
Primary source
ZFIN:ZDB-GENE-091204-265
See related
Ensembl:ENSDARG00000093044 AllianceGenome:ZFIN:ZDB-GENE-091204-265
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Summary
Predicted to be located in membrane. [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
all
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Genomic context

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See si:ch211-161h7.5 in Genome Data Viewer
Location:
chromosome: 24
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 24 NC_007135.7 (20910084..20915071, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 24 NC_007135.6 (20765468..20770843, complement)

Chromosome 24 - NC_007135.7Genomic Context describing neighboring genes Neighboring gene vasoactive intestinal peptide receptor 1b Neighboring gene si:ch211-161h7.4 Neighboring gene cystatin 14a, tandem duplicate 1 Neighboring gene cystatin 14a, tandem duplicate 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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Related articles in PubMed

  1. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by ZFIN

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
uncharacterized protein si:ch211-161h7.5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007135.7 Reference GRCz11 Primary Assembly

    Range
    20910084..20915071 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009297410.4 → XP_009295685.2  uncharacterized protein si:ch211-161h7.5

    UniProtKB/TrEMBL
    A0A8M2B9Q1, A0A8M3ANK0
    Related
    ENSDARP00000114560.1, ENSDART00000133763.2
Nucleotide Protein Strain
Heading Accession and Version

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