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fam83b family with sequence similarity 83 member B [ Danio rerio (zebrafish) ]

Gene ID: 568458, updated on 9-Dec-2024

Summary

Official Symbol
fam83bprovided by ZNC
Official Full Name
family with sequence similarity 83 member Bprovided by ZNC
Primary source
ZFIN:ZDB-GENE-030131-7066
See related
Ensembl:ENSDARG00000078309 AllianceGenome:ZFIN:ZDB-GENE-030131-7066
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
wu:fk73a07
Summary
Predicted to enable protein kinase binding activity. Predicted to be involved in signal transduction. Predicted to be active in cytoplasm and membrane. Orthologous to human FAM83B (family with sequence similarity 83 member B). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
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Genomic context

See fam83b in Genome Data Viewer
Location:
chromosome: 13
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 13 NC_007124.7 (2074927..2112157, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 13 NC_007124.6 (1943466..1981142, complement)

Chromosome 13 - NC_007124.7Genomic Context describing neighboring genes Neighboring gene 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1 Neighboring gene GDNF family receptor alpha like Neighboring gene hypocretin (orexin) receptor 2 Neighboring gene uncharacterized LOC137487352 Neighboring gene muscular LMNA-interacting protein

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables protein kinase binding  
Process Evidence Code Pubs
involved_in signal transduction  
Component Evidence Code Pubs
is_active_in cytoplasm  
is_active_in membrane  

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007124.7 Reference GRCz11 Primary Assembly

    Range
    2074927..2112157 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005170779.5 → XP_005170836.1  protein FAM83B

    See identical proteins and their annotated locations for XP_005170836.1

    UniProtKB/TrEMBL
    A0A8M2BI13, E7F4Q7
    Related
    ENSDARP00000154607.1, ENSDART00000189343.1
    Conserved Domains (2) summary
    cd09182
    Location:22 → 288
    PLDc_FAM83B_N; N-terminal phospholipase D-like domain of the uncharacterized protein, Family with sequence similarity 83B
    pfam13091
    Location:144 → 281
    PLDc_2; PLD-like domain
  2. XM_068212987.1 → XP_068069088.1  protein FAM83B

    UniProtKB/TrEMBL
    A0A8M2BI13, E7F4Q7
    Related
    ENSDARP00000099572.2, ENSDART00000110814.3
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