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olah oleoyl-ACP hydrolase [ Danio rerio (zebrafish) ]

Gene ID: 568096, updated on 9-Dec-2024

Summary

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Official Symbol
olahprovided by ZNC
Official Full Name
oleoyl-ACP hydrolaseprovided by ZNC
Primary source
ZFIN:ZDB-GENE-060312-17
See related
Ensembl:ENSDARG00000058502 AllianceGenome:ZFIN:ZDB-GENE-060312-17
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
zgc:136926
Summary
Predicted to enable fatty acyl-[ACP] hydrolase activity. Predicted to be involved in lipid biosynthetic process. Predicted to act upstream of or within fatty acid biosynthetic process. Orthologous to human OLAH (oleoyl-ACP hydrolase). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
human mouse all
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Genomic context

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See olah in Genome Data Viewer
Location:
chromosome: 19
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 19 NC_007130.7 (10649425..10656704, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 19 NC_007130.6 (10730500..10737799, complement)

Chromosome 19 - NC_007130.7Genomic Context describing neighboring genes Neighboring gene si:dkey-211g8.9 Neighboring gene tektin 2 (testicular) Neighboring gene argonaute RISC catalytic component 3b Neighboring gene solute carrier family 9 member A3, tandem duplicate 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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Related articles in PubMed

  1. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC136926

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables fatty acyl-[ACP] hydrolase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within lipid metabolic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
S-acyl fatty acid synthase thioesterase, medium chain
NP_001035021.2
NP_001418009.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001039932.2 → NP_001035021.2  S-acyl fatty acid synthase thioesterase, medium chain isoform 1

    Status: VALIDATED

    Source sequence(s)
    BX005424
    UniProtKB/TrEMBL
    A0A8M9PB35

  2. NM_001431080.1 → NP_001418009.1  S-acyl fatty acid synthase thioesterase, medium chain isoform 2

    Status: VALIDATED

    Source sequence(s)
    BX005424
    UniProtKB/TrEMBL
    A0A8M1N8R3, F6P4R8, Q29R98
    Related
    ENSDARP00000113288.1, ENSDART00000143271.3

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007130.7 Reference GRCz11 Primary Assembly

    Range
    10649425..10656704 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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