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LOC567909 LON peptidase N-terminal domain and RING finger protein 1 [ Danio rerio (zebrafish) ]

Gene ID: 567909, updated on 12-Sep-2024

Summary

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Gene symbol
LOC567909
Gene description
LON peptidase N-terminal domain and RING finger protein 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Orthologs
all
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Genomic context

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See LOC567909 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 8 NC_007119.7 (13700565..13737537)
105 previous assembly GRCz10 (GCF_000002035.5) 8 NC_007119.6 (13662150..13676604)

Chromosome 8 - NC_007119.7Genomic Context describing neighboring genes Neighboring gene very low-density lipoprotein receptor Neighboring gene novel protein similar to vertebrate pim oncogene family Neighboring gene si:dkey-258f14.3 Neighboring gene uncharacterized LOC101882298 Neighboring gene uncharacterized LOC100536890 Neighboring gene LON peptidase N-terminal domain and ring finger 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

General protein information

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Preferred Names
LON peptidase N-terminal domain and RING finger protein 1
Names
LON peptidase N-terminal domain and ring finger 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007119.7 Reference GRCz11 Primary Assembly

    Range
    13700565..13737537
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021478382.2 → XP_021334057.1  LON peptidase N-terminal domain and RING finger protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8M9PR91
    Conserved Domains (4) summary
    COG0457
    Location:177 → 273
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:177 → 202
    TPR; TPR repeat [structural motif]
    cd16513
    Location:108 → 144
    RING1-HC_LONFs; RING finger 1, HC subclass, found in the LON peptidase N-terminal domain and RING finger proteins family
    cl26688
    Location:83 → 192
    DWNN; DWNN domain

  2. XM_068223106.1 → XP_068079207.1  LON peptidase N-terminal domain and RING finger protein 1 isoform X2

Nucleotide Protein Strain
Heading Accession and Version

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