kgd4 alpha-ketoglutarate dehydrogenase subunit 4 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: kgd4provided by ZNC
Official Full Name: alpha-ketoglutarate dehydrogenase subunit 4provided by ZNC
Primary source: ZFIN:ZDB-GENE-081104-343
See related: Ensembl:ENSDARG00000079823 AllianceGenome:ZFIN:ZDB-GENE-081104-343
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: mrps36; si:dkey-190g11.7
Summary: Predicted to be involved in 2-oxoglutarate metabolic process. Predicted to be located in mitochondrion and ribosome. Predicted to be part of oxoglutarate dehydrogenase complex. Orthologous to human KGD4 (alpha-ketoglutarate dehydrogenase subunit 4). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 8

Exon count:: 5

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	8	NC_007119.7 (17163494..17167830, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	8	NC_007119.6 (17127782..17132121, complement)

Chromosome 8 - NC_007119.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

fc12d09.x1 (e-PCR)
- UniSTS:192571

fc12d09.x1 (e-PCR)
- UniSTS:192572

Gene Ontology Provided by ZFIN

Process	Evidence Code	Pubs
involved_in 2-oxoglutarate metabolic process	IBA Inferred from Biological aspect of Ancestor more info
acts_upstream_of_or_within 2-oxoglutarate metabolic process	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in mitochondrion	IEA Inferred from Electronic Annotation more info
part_of oxoglutarate dehydrogenase complex	IBA Inferred from Biological aspect of Ancestor more info
part_of ribonucleoprotein complex	IEA Inferred from Electronic Annotation more info
located_in ribosome	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: alpha-ketoglutarate dehydrogenase component 4

Names: mitochondrial ribosomal protein S36

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.