si:dkey-192p21.6 si:dkey-192p21.6 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: si:dkey-192p21.6provided by ZNC
Official Full Name: si:dkey-192p21.6provided by ZNC
Primary source: ZFIN:ZDB-GENE-060503-809
See related: Ensembl:ENSDARG00000091212 AllianceGenome:ZFIN:ZDB-GENE-060503-809
Gene type: protein coding
RefSeq status: PREDICTED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Summary: Predicted to be located in membrane. [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: all
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Genomic context

See si:dkey-192p21.6 in Genome Data Viewer

Location:: chromosome: 13

Exon count:: 21

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	13	NC_007124.7 (25642001..25721100, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	13	NC_007124.6 (25511551..25590650, complement)

Chromosome 13 - NC_007124.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: uncharacterized protein LOC565246

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001145587.1 → NP_001139059.1 uncharacterized protein LOC565246 precursor

Status: PREDICTED

Source sequence(s)

BX005252, BX663512

UniProtKB/TrEMBL

A0A8M1NTB9, A8E7C4

Related

ENSDARP00000121103.1, ENSDART00000135383.3

Conserved Domains (1) summary

cl21495
Location:203 → 582

DUF418; Protein of unknown function (DUF418)

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

NC_007124.7 Reference GRCz11 Primary Assembly

Range

25642001..25721100 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_009307340.2 → XP_009305615.1 uncharacterized protein LOC565246 isoform X2

UniProtKB/TrEMBL

A0A8M3AZ68

Conserved Domains (1) summary

cl21495
Location:198 → 592

DUF418; Protein of unknown function (DUF418)
XM_017358773.1 → XP_017214262.1 uncharacterized protein LOC565246 isoform X1

UniProtKB/TrEMBL

A0A8M6Z3U7
XM_068212896.1 → XP_068068997.1 uncharacterized protein LOC565246 isoform X3
XM_009307339.3 → XP_009305614.1 uncharacterized protein LOC565246 isoform X5

UniProtKB/TrEMBL

A0A8M3B5A1

Conserved Domains (1) summary

cl21495
Location:203 → 597

DUF418; Protein of unknown function (DUF418)
XM_068212897.1 → XP_068068998.1 uncharacterized protein LOC565246 isoform X4