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LOC564748 leucine-rich repeat neuronal protein 4 [ Danio rerio (zebrafish) ]

Gene ID: 564748, updated on 12-Sep-2024

Summary

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Gene symbol
LOC564748
Gene description
leucine-rich repeat neuronal protein 4
See related
Ensembl:ENSDARG00000116863
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Orthologs
all
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Genomic context

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See LOC564748 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 5 NC_007116.7 (37480600..37496738)
105 previous assembly GRCz10 (GCF_000002035.5) 5 NC_007116.6 (36888019..36896584)

Chromosome 5 - NC_007116.7Genomic Context describing neighboring genes Neighboring gene WD repeat domain 44 Neighboring gene kelch-like family member 13 Neighboring gene uncharacterized LOC137495610 Neighboring gene si:ch1073-224n8.1 Neighboring gene latent transforming growth factor beta binding protein 3 Neighboring gene transfer RNA methionine (anticodon CAU)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
leucine-rich repeat neuronal protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007116.7 Reference GRCz11 Primary Assembly

    Range
    37480600..37496738
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_068221462.1 → XP_068077563.1  leucine-rich repeat neuronal protein 4 isoform X2

  2. XM_688081.10 → XP_693173.5  leucine-rich repeat neuronal protein 4 isoform X1

    UniProtKB/TrEMBL
    A0A2R8RVM5, A0A8N7T7G5
    Related
    ENSDARP00000153860.1, ENSDART00000184659.1
    Conserved Domains (1) summary
    pfam00041
    Location:109 → 185
    fn3; Fibronectin type III domain
Nucleotide Protein Strain
Heading Accession and Version

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